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The map label for this gene is flgF [H]

Identifier: 192290682

GI number: 192290682

Start: 2484729

End: 2485463

Strand: Reverse

Name: flgF [H]

Synonym: Rpal_2294

Alternate gene names: 192290682

Gene position: 2485463-2484729 (Counterclockwise)

Preceding gene: 192290683

Following gene: 192290681

Centisome position: 43.27

GC content: 58.23

Gene sequence:

>735_bases
ATGTCGGACAAAACCGTTATTGGGCTTTCGCGGCTGATTGCGCTTCAACAGCAGGTCGATAACTTGGCGCGCAACGTCGC
AAACCAGAACACCACCGGCTTCAAGCGCGAGGGCATCCGATTTCTCGAATATCTGACAGACGCAAAAGAGGCCGATGATA
TCCCTTCGGCGCCAAAGAGATCGCTCGTAGCGGTCACCGGATACACTGACTTTTCCGCAGGCTCGCTTCAGCTCACCGGA
AACTCCACCGATGCCGCCGTGCTTGAAGACGGCTTCTTCGTCGTCAGGACCAGTCGAGGGGATCGCTACACCCGAAACGG
GGCGTTCACCCTCGACAAACAGGGGCGCCTGGTCACGCTGTCGGGGGATCTCGTGCTCGCCGCCAACGGCACAATCAAAG
TGCCCTTGACCGACTTGAACCTCAGCATCGGCACGGACGGAACTATTTCGACGGCGCGATCGATCATCGGGCGGCTTCGG
GTCGTGAAATTTGACGATCCCCGCTCTCTGGTCGCCGAGGGTACGGGACTCTTCGCGTCAGGGAGCCCGCCGATAGAGCT
GAATGCGGGAAGCATTCGATTAGCTACAAATGCCCTCGAACGATCGAACGTAAACTCCATCCGCGAGATGAGCGATCTCG
TAGCCGCGACCCGCGCCTACGAGCAAGTCGCGAATGTAGTTCTGAAAGACGGCGATCCAAACGAGCTGAAAACGCTCGCC
GGAGAGGATCTATGA

Upstream 100 bases:

>100_bases
CGCAAATCAAATGGATCGGCCTTTGCCAAAGAAATTCAGCCACCCCAGCTCTCGAAAGGACCGTCGAGTGACTGGTGCCG
ATGAAGGGACGTTATCTTTC

Downstream 100 bases:

>100_bases
CGAATTGCGATGGCACCGCCGCGAACAATCCGCGGCCGCCCGCTCTTACCCCGATGAGGCACTCTTCGCACTGCATCCAT
CGGACGGCAACCGCCTGAGT

Product: flagellar basal body rod protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MSDKTVIGLSRLIALQQQVDNLARNVANQNTTGFKREGIRFLEYLTDAKEADDIPSAPKRSLVAVTGYTDFSAGSLQLTG
NSTDAAVLEDGFFVVRTSRGDRYTRNGAFTLDKQGRLVTLSGDLVLAANGTIKVPLTDLNLSIGTDGTISTARSIIGRLR
VVKFDDPRSLVAEGTGLFASGSPPIELNAGSIRLATNALERSNVNSIREMSDLVAATRAYEQVANVVLKDGDPNELKTLA
GEDL

Sequences:

>Translated_244_residues
MSDKTVIGLSRLIALQQQVDNLARNVANQNTTGFKREGIRFLEYLTDAKEADDIPSAPKRSLVAVTGYTDFSAGSLQLTG
NSTDAAVLEDGFFVVRTSRGDRYTRNGAFTLDKQGRLVTLSGDLVLAANGTIKVPLTDLNLSIGTDGTISTARSIIGRLR
VVKFDDPRSLVAEGTGLFASGSPPIELNAGSIRLATNALERSNVNSIREMSDLVAATRAYEQVANVVLKDGDPNELKTLA
GEDL
>Mature_243_residues
SDKTVIGLSRLIALQQQVDNLARNVANQNTTGFKREGIRFLEYLTDAKEADDIPSAPKRSLVAVTGYTDFSAGSLQLTGN
STDAAVLEDGFFVVRTSRGDRYTRNGAFTLDKQGRLVTLSGDLVLAANGTIKVPLTDLNLSIGTDGTISTARSIIGRLRV
VKFDDPRSLVAEGTGLFASGSPPIELNAGSIRLATNALERSNVNSIREMSDLVAATRAYEQVANVVLKDGDPNELKTLAG
EDL

Specific function: Unknown

COG id: COG4786

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787318, Length=239, Percent_Identity=32.6359832635983, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1787317, Length=241, Percent_Identity=33.195020746888, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 26062; Mature: 25930

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKTVIGLSRLIALQQQVDNLARNVANQNTTGFKREGIRFLEYLTDAKEADDIPSAPKR
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHCCCCCCCCCC
SLVAVTGYTDFSAGSLQLTGNSTDAAVLEDGFFVVRTSRGDRYTRNGAFTLDKQGRLVTL
CEEEEECCCCCCCCEEEEECCCCCCEEEECCEEEEEECCCCCEECCCCEEECCCCCEEEE
SGDLVLAANGTIKVPLTDLNLSIGTDGTISTARSIIGRLRVVKFDDPRSLVAEGTGLFAS
ECCEEEEECCEEEEEEEECEEEECCCCCHHHHHHHHHHEEEEEECCCHHHHHCCCCEEEC
GSPPIELNAGSIRLATNALERSNVNSIREMSDLVAATRAYEQVANVVLKDGDPNELKTLA
CCCCEEECCCEEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHC
GEDL
CCCC
>Mature Secondary Structure 
SDKTVIGLSRLIALQQQVDNLARNVANQNTTGFKREGIRFLEYLTDAKEADDIPSAPKR
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHCCCCCCCCCC
SLVAVTGYTDFSAGSLQLTGNSTDAAVLEDGFFVVRTSRGDRYTRNGAFTLDKQGRLVTL
CEEEEECCCCCCCCEEEEECCCCCCEEEECCEEEEEECCCCCEECCCCEEECCCCCEEEE
SGDLVLAANGTIKVPLTDLNLSIGTDGTISTARSIIGRLRVVKFDDPRSLVAEGTGLFAS
ECCEEEEECCEEEEEEEECEEEECCCCCHHHHHHHHHHEEEEEECCCHHHHHCCCCEEEC
GSPPIELNAGSIRLATNALERSNVNSIREMSDLVAATRAYEQVANVVLKDGDPNELKTLA
CCCCEEECCCEEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHC
GEDL
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1474584; 11259647 [H]