| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290673
Identifier: 192290673
GI number: 192290673
Start: 2474118
End: 2474801
Strand: Reverse
Name: 192290673
Synonym: Rpal_2285
Alternate gene names: NA
Gene position: 2474801-2474118 (Counterclockwise)
Preceding gene: 192290677
Following gene: 192290671
Centisome position: 43.08
GC content: 58.04
Gene sequence:
>684_bases ATGTTGCTGGGACAGCCTGAGAAAAACACCCATGGCAATGTCCGACCGCCATCCCTAGATCAGGGAAGCCAATCTTATCG GACGGGACAGACTGGTAGGCGACTTTGGAAGAAGCATCGAATGCACCAAAATCGCGGTCGTGAAAAGAGTGAAGGAAAGA CGAGAACATGTATGCCGCCAGGACGACAATCGTGGCGACTCCGCGTAGCGAAAGCGGACGACGGCTGCAGCCCGGGATCG TATGGTAAGGTGTCAAGCGGCGTCTCTCGATCTGCCTCCACCCTAGCACGACACCTATTATGCAGTCGACCACATTGTTG CGCGATGCTCTCTACGTCCGGAAGAGCATCGCTGTCTAAGATGGCCTTCATAGAACGGCGCGCGGCCTTGATCGGCATCC GCCGCATCAGCCAACCTAGCGTTTCTGGCAGAGTAGACCTGAGCGGCAGGCCCCGAAAAGAGCCGCTCTTGGTTGAGCGC CTATCCAAATGCTTTCGCTTCCCTTTTGACGCGACGGGTCCTGCCGGCCCCCGCGCGCGGCTGAGAGAGCTTCGAGATTG CGTTTTTGAGCCCGACCTGTCCGTACTTTCCGCCACCGGTGACGGACAAAGATGTCCGCGCAGGATAGTCAGCACGTCGA TCGGCCCCTCCCGGACAGTATCGACTGCGCTACTGTCATCATGA
Upstream 100 bases:
>100_bases GGAGGCGGAGGATCAATCCCTCGTGCCGGGCAGGTCAGAGGGATCGCAACCAAGGCAAACGCATCATCCTTGATCGCGAC TGGGGCCGAGGTAGCGACCA
Downstream 100 bases:
>100_bases TGACGTCGGCGATGATGTCGGACGGCGGCTCACGCGGTGAGGCGAGCGCAATACGCTGCTGTTCGATCCCCTGCCGGTGT CGATTCGTTGTCGTGTCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MLLGQPEKNTHGNVRPPSLDQGSQSYRTGQTGRRLWKKHRMHQNRGREKSEGKTRTCMPPGRQSWRLRVAKADDGCSPGS YGKVSSGVSRSASTLARHLLCSRPHCCAMLSTSGRASLSKMAFIERRAALIGIRRISQPSVSGRVDLSGRPRKEPLLVER LSKCFRFPFDATGPAGPRARLRELRDCVFEPDLSVLSATGDGQRCPRRIVSTSIGPSRTVSTALLSS
Sequences:
>Translated_227_residues MLLGQPEKNTHGNVRPPSLDQGSQSYRTGQTGRRLWKKHRMHQNRGREKSEGKTRTCMPPGRQSWRLRVAKADDGCSPGS YGKVSSGVSRSASTLARHLLCSRPHCCAMLSTSGRASLSKMAFIERRAALIGIRRISQPSVSGRVDLSGRPRKEPLLVER LSKCFRFPFDATGPAGPRARLRELRDCVFEPDLSVLSATGDGQRCPRRIVSTSIGPSRTVSTALLSS >Mature_227_residues MLLGQPEKNTHGNVRPPSLDQGSQSYRTGQTGRRLWKKHRMHQNRGREKSEGKTRTCMPPGRQSWRLRVAKADDGCSPGS YGKVSSGVSRSASTLARHLLCSRPHCCAMLSTSGRASLSKMAFIERRAALIGIRRISQPSVSGRVDLSGRPRKEPLLVER LSKCFRFPFDATGPAGPRARLRELRDCVFEPDLSVLSATGDGQRCPRRIVSTSIGPSRTVSTALLSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24939; Mature: 24939
Theoretical pI: Translated: 11.85; Mature: 11.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLGQPEKNTHGNVRPPSLDQGSQSYRTGQTGRRLWKKHRMHQNRGREKSEGKTRTCMPP CCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GRQSWRLRVAKADDGCSPGSYGKVSSGVSRSASTLARHLLCSRPHCCAMLSTSGRASLSK CCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHH MAFIERRAALIGIRRISQPSVSGRVDLSGRPRKEPLLVERLSKCFRFPFDATGPAGPRAR HHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHH LRELRDCVFEPDLSVLSATGDGQRCPRRIVSTSIGPSRTVSTALLSS HHHHHHHHCCCCCCEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHCC >Mature Secondary Structure MLLGQPEKNTHGNVRPPSLDQGSQSYRTGQTGRRLWKKHRMHQNRGREKSEGKTRTCMPP CCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GRQSWRLRVAKADDGCSPGSYGKVSSGVSRSASTLARHLLCSRPHCCAMLSTSGRASLSK CCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHH MAFIERRAALIGIRRISQPSVSGRVDLSGRPRKEPLLVERLSKCFRFPFDATGPAGPRAR HHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHH LRELRDCVFEPDLSVLSATGDGQRCPRRIVSTSIGPSRTVSTALLSS HHHHHHHHCCCCCCEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA