| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290660
Identifier: 192290660
GI number: 192290660
Start: 2458366
End: 2458677
Strand: Reverse
Name: 192290660
Synonym: Rpal_2269
Alternate gene names: NA
Gene position: 2458677-2458366 (Counterclockwise)
Preceding gene: 192290661
Following gene: 192290659
Centisome position: 42.8
GC content: 64.42
Gene sequence:
>312_bases TTGCTGCTGACGCATGCCCTCCGCCTAATCGCTTTCGTCTTCGCCGTCGGCGCCATCGCCGCCGGCACGACGGCGCACTT CGCGGGGGCGATCTACGTCAACGTCCGGCGGCAGATCGACCAGATCGCCGCCGATGAGTGCGACAACATGCGGCGCATGG CCGACGAGATCAGCGAGTTCGATCCGGAAGCGCGCCGGGATCCGATGCCGGAGATGTGCGCCAAGCTGCCGAAGCAGGGA GGTGAGGATGACAACGATCGACGAGATCCCAGGGATGCTGCAGAAGAATGGACTCCAGGAGATCGCTGCTGA
Upstream 100 bases:
>100_bases TGGAGCCCTCCGTCTTCGAGTTCAGAACTCAGACCGACGACACGACGGATGCAGGCGCCGCAACCAAGGTTCCTCCTGAC TGGAAGATTGATCGTACGCG
Downstream 100 bases:
>100_bases GTTCGAGTTGATGCAGCAGGTCTCCTTCGTCCTCGCCGTCGGAGCCGTGATTGCCGGCACGACGGCGCACTTCGCGGGGG CGATCTACGTCCACGTCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MLLTHALRLIAFVFAVGAIAAGTTAHFAGAIYVNVRRQIDQIAADECDNMRRMADEISEFDPEARRDPMPEMCAKLPKQG GEDDNDRRDPRDAAEEWTPGDRC
Sequences:
>Translated_103_residues MLLTHALRLIAFVFAVGAIAAGTTAHFAGAIYVNVRRQIDQIAADECDNMRRMADEISEFDPEARRDPMPEMCAKLPKQG GEDDNDRRDPRDAAEEWTPGDRC >Mature_103_residues MLLTHALRLIAFVFAVGAIAAGTTAHFAGAIYVNVRRQIDQIAADECDNMRRMADEISEFDPEARRDPMPEMCAKLPKQG GEDDNDRRDPRDAAEEWTPGDRC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11506; Mature: 11506
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLTHALRLIAFVFAVGAIAAGTTAHFAGAIYVNVRRQIDQIAADECDNMRRMADEISEF CHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DPEARRDPMPEMCAKLPKQGGEDDNDRRDPRDAAEEWTPGDRC CCHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCC >Mature Secondary Structure MLLTHALRLIAFVFAVGAIAAGTTAHFAGAIYVNVRRQIDQIAADECDNMRRMADEISEF CHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DPEARRDPMPEMCAKLPKQGGEDDNDRRDPRDAAEEWTPGDRC CCHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA