The gene/protein map for NC_011004 is currently unavailable.
Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

Click here to switch to the map view.

The map label for this gene is 192290658

Identifier: 192290658

GI number: 192290658

Start: 2457778

End: 2458128

Strand: Reverse

Name: 192290658

Synonym: Rpal_2267

Alternate gene names: NA

Gene position: 2458128-2457778 (Counterclockwise)

Preceding gene: 192290659

Following gene: 192290657

Centisome position: 42.79

GC content: 55.27

Gene sequence:

>351_bases
ATGGTACCAACACATGAAGCATTTCTTCTTCGTCAGAAGATCAACTACCTGCAGGCCCTGTTCGAGGGAGACTTCTCGTC
GTCGTCTCCGGAGAGAGCCGCGCAAGAAGGACTGGCACGGCTCATCGCGAAAGCCGCTGGATGGAAGGCCGTCGGTTCTA
CCTACCAGCACGAAACGAAAGGAAGCTACCTGATCCGCGAGATGGACGGATGGAGCGACCTTTGCATGATCGAATGCCTA
GCCGTAGAGGACTGGATTGAGAAGATCACTCCGCCGCCGCCGTTGCGTAACATCCTTCCGATCTTGAGAGATCGAGAGAA
CTATCTCAACGGCAATGGGAGCGCGTCATGA

Upstream 100 bases:

>100_bases
ACATGCGAAAGCTCGCCGACGAGATCCGCGAGATCGATCCGGAAGAGCGCCGTAACCCGGTGCCGGAGATGTGCGCCGAC
ATGGGCAACAGGAGCGAGTG

Downstream 100 bases:

>100_bases
CCACTGCGACCACTGTCTTTCACCTTAACGCCGCCGAGGCCGATCTCATACGCCGAGGCGCCGCGCGCAGATCGCCTCCG
ATGAACTCCGCCGGATCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MVPTHEAFLLRQKINYLQALFEGDFSSSSPERAAQEGLARLIAKAAGWKAVGSTYQHETKGSYLIREMDGWSDLCMIECL
AVEDWIEKITPPPPLRNILPILRDRENYLNGNGSAS

Sequences:

>Translated_116_residues
MVPTHEAFLLRQKINYLQALFEGDFSSSSPERAAQEGLARLIAKAAGWKAVGSTYQHETKGSYLIREMDGWSDLCMIECL
AVEDWIEKITPPPPLRNILPILRDRENYLNGNGSAS
>Mature_116_residues
MVPTHEAFLLRQKINYLQALFEGDFSSSSPERAAQEGLARLIAKAAGWKAVGSTYQHETKGSYLIREMDGWSDLCMIECL
AVEDWIEKITPPPPLRNILPILRDRENYLNGNGSAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13009; Mature: 13009

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPTHEAFLLRQKINYLQALFEGDFSSSSPERAAQEGLARLIAKAAGWKAVGSTYQHETK
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCC
GSYLIREMDGWSDLCMIECLAVEDWIEKITPPPPLRNILPILRDRENYLNGNGSAS
CCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MVPTHEAFLLRQKINYLQALFEGDFSSSSPERAAQEGLARLIAKAAGWKAVGSTYQHETK
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCC
GSYLIREMDGWSDLCMIECLAVEDWIEKITPPPPLRNILPILRDRENYLNGNGSAS
CCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA