| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290658
Identifier: 192290658
GI number: 192290658
Start: 2457778
End: 2458128
Strand: Reverse
Name: 192290658
Synonym: Rpal_2267
Alternate gene names: NA
Gene position: 2458128-2457778 (Counterclockwise)
Preceding gene: 192290659
Following gene: 192290657
Centisome position: 42.79
GC content: 55.27
Gene sequence:
>351_bases ATGGTACCAACACATGAAGCATTTCTTCTTCGTCAGAAGATCAACTACCTGCAGGCCCTGTTCGAGGGAGACTTCTCGTC GTCGTCTCCGGAGAGAGCCGCGCAAGAAGGACTGGCACGGCTCATCGCGAAAGCCGCTGGATGGAAGGCCGTCGGTTCTA CCTACCAGCACGAAACGAAAGGAAGCTACCTGATCCGCGAGATGGACGGATGGAGCGACCTTTGCATGATCGAATGCCTA GCCGTAGAGGACTGGATTGAGAAGATCACTCCGCCGCCGCCGTTGCGTAACATCCTTCCGATCTTGAGAGATCGAGAGAA CTATCTCAACGGCAATGGGAGCGCGTCATGA
Upstream 100 bases:
>100_bases ACATGCGAAAGCTCGCCGACGAGATCCGCGAGATCGATCCGGAAGAGCGCCGTAACCCGGTGCCGGAGATGTGCGCCGAC ATGGGCAACAGGAGCGAGTG
Downstream 100 bases:
>100_bases CCACTGCGACCACTGTCTTTCACCTTAACGCCGCCGAGGCCGATCTCATACGCCGAGGCGCCGCGCGCAGATCGCCTCCG ATGAACTCCGCCGGATCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MVPTHEAFLLRQKINYLQALFEGDFSSSSPERAAQEGLARLIAKAAGWKAVGSTYQHETKGSYLIREMDGWSDLCMIECL AVEDWIEKITPPPPLRNILPILRDRENYLNGNGSAS
Sequences:
>Translated_116_residues MVPTHEAFLLRQKINYLQALFEGDFSSSSPERAAQEGLARLIAKAAGWKAVGSTYQHETKGSYLIREMDGWSDLCMIECL AVEDWIEKITPPPPLRNILPILRDRENYLNGNGSAS >Mature_116_residues MVPTHEAFLLRQKINYLQALFEGDFSSSSPERAAQEGLARLIAKAAGWKAVGSTYQHETKGSYLIREMDGWSDLCMIECL AVEDWIEKITPPPPLRNILPILRDRENYLNGNGSAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13009; Mature: 13009
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPTHEAFLLRQKINYLQALFEGDFSSSSPERAAQEGLARLIAKAAGWKAVGSTYQHETK CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCC GSYLIREMDGWSDLCMIECLAVEDWIEKITPPPPLRNILPILRDRENYLNGNGSAS CCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MVPTHEAFLLRQKINYLQALFEGDFSSSSPERAAQEGLARLIAKAAGWKAVGSTYQHETK CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCC GSYLIREMDGWSDLCMIECLAVEDWIEKITPPPPLRNILPILRDRENYLNGNGSAS CCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA