| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
Click here to switch to the map view.
The map label for this gene is 192290548
Identifier: 192290548
GI number: 192290548
Start: 2336407
End: 2336619
Strand: Reverse
Name: 192290548
Synonym: Rpal_2157
Alternate gene names: NA
Gene position: 2336619-2336407 (Counterclockwise)
Preceding gene: 192290553
Following gene: 192290547
Centisome position: 40.68
GC content: 61.5
Gene sequence:
>213_bases ATGCAACTGCGGCAATGGCACGACGGAAGACGAACGCAGCCGGCTCGCACCCCGGCCACGCCCGCTTCGTTGCTCGACGC TGGCGTCGATTACTTGCGCGCCGCGCAGGCGTACATGTTGATTTCCATGCCGACCGCGATCTCGACGATTTCCGGTTTCT TCCAGGCCATGAGGTCCTCCCGATTTGCTGGTCTGATGCCGCAATGGGTTTGA
Upstream 100 bases:
>100_bases ACCGGACAGCCGCAATTCCACTGCGGCACGCCGCCACCGGCAGCGGCTCCCAAAACGATCACGCGTAGCATCGGGCGCCT TTTCGGCGGGAGATCGCAGA
Downstream 100 bases:
>100_bases GGATAGGTCTGCTTCCTAACCCGCGCAAGCAAACAGCGTTGCGCGGTGCAGCGATCACTCCGCGGTGATGCAGTGACCAT CTGGTGCGCAATCGCCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MQLRQWHDGRRTQPARTPATPASLLDAGVDYLRAAQAYMLISMPTAISTISGFFQAMRSSRFAGLMPQWV
Sequences:
>Translated_70_residues MQLRQWHDGRRTQPARTPATPASLLDAGVDYLRAAQAYMLISMPTAISTISGFFQAMRSSRFAGLMPQWV >Mature_70_residues MQLRQWHDGRRTQPARTPATPASLLDAGVDYLRAAQAYMLISMPTAISTISGFFQAMRSSRFAGLMPQWV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7828; Mature: 7828
Theoretical pI: Translated: 11.75; Mature: 11.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.1 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLRQWHDGRRTQPARTPATPASLLDAGVDYLRAAQAYMLISMPTAISTISGFFQAMRSS CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RFAGLMPQWV CCCCCCCCCC >Mature Secondary Structure MQLRQWHDGRRTQPARTPATPASLLDAGVDYLRAAQAYMLISMPTAISTISGFFQAMRSS CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RFAGLMPQWV CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA