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The map label for this gene is frc [H]

Identifier: 192290546

GI number: 192290546

Start: 2333972

End: 2335249

Strand: Reverse

Name: frc [H]

Synonym: Rpal_2155

Alternate gene names: 192290546

Gene position: 2335249-2333972 (Counterclockwise)

Preceding gene: 192290547

Following gene: 192290545

Centisome position: 40.66

GC content: 65.65

Gene sequence:

>1278_bases
ATGACCAAGGCGCTCGACGGCGTTCGCGTTCTCGACTTCACCCACGTCCAATCCGGCCCGACCTGCACGCAGCTCTTGGC
GTGGTTCGGTGCCGACGTGATCAAGGTGGAGCGCCCCGGCAGCGGCGACATCACCCGCGGTCAGCTGCAGGACATCCCGA
AGGTGGACAGCCTGTATTTCACCATGCTGAACCACAACAAGCGGTCGATCACGCTCGACACCAAGAACCCGAAGGGCAAG
GAGGTGCTGACCGCGCTGATCCGCACCTGCGACGTGCTGGTAGAGAATTTCGGCCCCGGTGTGCTCGACCGGATGGGCTT
CACCTGGGAGAAGATCCAGGAGATCAACCCGCGGATGATCGTCGCCTCGATCAAGGGCTTCGGTCCCGGCCCGTATGAAG
ACTGCAAGGTGTACGAGAACGTTGCGCAGTGCACCGGCGGCGCCGCCTCGACCACCGGATTCCGCGAAGGCCTGCCGCTG
GTCACCGGCGCGCAGATCGGCGATAGCGGCACCGGCCTGCATCTCGCACTCGGCATCGTCACCGCGCTGTATCAGCGCCA
CCACACCGGCCGCGGCCAGCGCGTCACCGCGGCGATGCAGGACGGCGTGCTGAACCTCTGCCGCGTCAAGCTGCGCGATC
AGCAGCGCCTCGACCATGGTCCGCTGAAGGAATACAGCCAGTTCGGCGAAGGCATCCCGTTCGGCGATGCGGTGCCGCGT
GCCGGCAACGATTCCGGTGGCGGCCAGCCCGGCCGCATCCTGAAGTGCAAGGGCTGGGAGCAGGATCCGAACGCCTACAT
CTACGTCATCACCCAGGCGCCGGTGTGGGAGAAGATCTGCGACGTGATCGGCGAGACCGGCTGGAAGATGCACCCCGACT
ACGCCACGCCGCCGGCGCGGCTGTCGCGGCTCAACGAGATCTTCGCGCGCATTGAGCAATGGACCATGACCAAGACCAAG
TTCGAGGCCATGGAGATCCTCAACGCCGACGACATCCCCTGCGGCCCGATCCTGTCGATGAAGGAACTCGCCGAAGATCA
GTCGCTGCGCGCCACCGGCACCATCGTCGAGGTCGATCACCCGACCCGCGGCAAGTATCTGTCGGTCGGCAACCCGATCA
AGCTGTCGGACTCCCCGACCGAGGTGAAGCGCTCGCCGCTACTCGGTGAACACACCGACGAAATCCTGCGCGACGTCCTC
GGCTACAGCGACGCGCACGTCGCAGAGATCCACGACTCCGGCGCGACCGCTCCGCCGCGCAAGCAAGCGGCGGAGTAA

Upstream 100 bases:

>100_bases
CGACGCGACATAACAAGGACGTTCGTCGCGGATCGCCGCGGCGGACGTACCGATGGGAGAGATGCCGCTTCGGCGCGCAA
GAGACAACAGGAGCACGACC

Downstream 100 bases:

>100_bases
TTGCTGCAACGCATTCGCCGCGCCCGGACACCACGGGCGCGGCCGGACTAACTCGTCTTGATGTAATAACAAGTCACGTC
GTTATTTCCCTCCTTGCGCC

Product: formyl-coenzyme A transferase

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MTKALDGVRVLDFTHVQSGPTCTQLLAWFGADVIKVERPGSGDITRGQLQDIPKVDSLYFTMLNHNKRSITLDTKNPKGK
EVLTALIRTCDVLVENFGPGVLDRMGFTWEKIQEINPRMIVASIKGFGPGPYEDCKVYENVAQCTGGAASTTGFREGLPL
VTGAQIGDSGTGLHLALGIVTALYQRHHTGRGQRVTAAMQDGVLNLCRVKLRDQQRLDHGPLKEYSQFGEGIPFGDAVPR
AGNDSGGGQPGRILKCKGWEQDPNAYIYVITQAPVWEKICDVIGETGWKMHPDYATPPARLSRLNEIFARIEQWTMTKTK
FEAMEILNADDIPCGPILSMKELAEDQSLRATGTIVEVDHPTRGKYLSVGNPIKLSDSPTEVKRSPLLGEHTDEILRDVL
GYSDAHVAEIHDSGATAPPRKQAAE

Sequences:

>Translated_425_residues
MTKALDGVRVLDFTHVQSGPTCTQLLAWFGADVIKVERPGSGDITRGQLQDIPKVDSLYFTMLNHNKRSITLDTKNPKGK
EVLTALIRTCDVLVENFGPGVLDRMGFTWEKIQEINPRMIVASIKGFGPGPYEDCKVYENVAQCTGGAASTTGFREGLPL
VTGAQIGDSGTGLHLALGIVTALYQRHHTGRGQRVTAAMQDGVLNLCRVKLRDQQRLDHGPLKEYSQFGEGIPFGDAVPR
AGNDSGGGQPGRILKCKGWEQDPNAYIYVITQAPVWEKICDVIGETGWKMHPDYATPPARLSRLNEIFARIEQWTMTKTK
FEAMEILNADDIPCGPILSMKELAEDQSLRATGTIVEVDHPTRGKYLSVGNPIKLSDSPTEVKRSPLLGEHTDEILRDVL
GYSDAHVAEIHDSGATAPPRKQAAE
>Mature_424_residues
TKALDGVRVLDFTHVQSGPTCTQLLAWFGADVIKVERPGSGDITRGQLQDIPKVDSLYFTMLNHNKRSITLDTKNPKGKE
VLTALIRTCDVLVENFGPGVLDRMGFTWEKIQEINPRMIVASIKGFGPGPYEDCKVYENVAQCTGGAASTTGFREGLPLV
TGAQIGDSGTGLHLALGIVTALYQRHHTGRGQRVTAAMQDGVLNLCRVKLRDQQRLDHGPLKEYSQFGEGIPFGDAVPRA
GNDSGGGQPGRILKCKGWEQDPNAYIYVITQAPVWEKICDVIGETGWKMHPDYATPPARLSRLNEIFARIEQWTMTKTKF
EAMEILNADDIPCGPILSMKELAEDQSLRATGTIVEVDHPTRGKYLSVGNPIKLSDSPTEVKRSPLLGEHTDEILRDVLG
YSDAHVAEIHDSGATAPPRKQAAE

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=416, Percent_Identity=30.0480769230769, Blast_Score=184, Evalue=1e-46,
Organism=Homo sapiens, GI300863124, Length=442, Percent_Identity=28.9592760180996, Blast_Score=172, Evalue=5e-43,
Organism=Homo sapiens, GI266456254, Length=424, Percent_Identity=27.5943396226415, Blast_Score=126, Evalue=3e-29,
Organism=Homo sapiens, GI42794625, Length=424, Percent_Identity=27.5943396226415, Blast_Score=126, Evalue=4e-29,
Organism=Homo sapiens, GI300863126, Length=152, Percent_Identity=44.078947368421, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI13376042, Length=440, Percent_Identity=25.2272727272727, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI266458397, Length=215, Percent_Identity=34.4186046511628, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI266458393, Length=215, Percent_Identity=34.4186046511628, Blast_Score=109, Evalue=5e-24,
Organism=Homo sapiens, GI266458395, Length=126, Percent_Identity=38.8888888888889, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI42822893, Length=126, Percent_Identity=38.8888888888889, Blast_Score=86, Evalue=5e-17,
Organism=Escherichia coli, GI1788717, Length=417, Percent_Identity=61.1510791366906, Blast_Score=484, Evalue=1e-138,
Organism=Escherichia coli, GI87082093, Length=403, Percent_Identity=32.7543424317618, Blast_Score=183, Evalue=2e-47,
Organism=Escherichia coli, GI1786222, Length=427, Percent_Identity=23.6533957845433, Blast_Score=73, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI32564160, Length=210, Percent_Identity=28.0952380952381, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI115535051, Length=357, Percent_Identity=22.6890756302521, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24648431, Length=411, Percent_Identity=31.8734793187348, Blast_Score=194, Evalue=1e-49,
Organism=Drosophila melanogaster, GI24585488, Length=200, Percent_Identity=33.5, Blast_Score=104, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 46512; Mature: 46381

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKALDGVRVLDFTHVQSGPTCTQLLAWFGADVIKVERPGSGDITRGQLQDIPKVDSLYF
CCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHCCCCHHHHHH
TMLNHNKRSITLDTKNPKGKEVLTALIRTCDVLVENFGPGVLDRMGFTWEKIQEINPRMI
HEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHCCCEEE
VASIKGFGPGPYEDCKVYENVAQCTGGAASTTGFREGLPLVTGAQIGDSGTGLHLALGIV
EEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHCCCCEEECCCCCCCCCCHHHHHHHH
TALYQRHHTGRGQRVTAAMQDGVLNLCRVKLRDQQRLDHGPLKEYSQFGEGIPFGDAVPR
HHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCC
AGNDSGGGQPGRILKCKGWEQDPNAYIYVITQAPVWEKICDVIGETGWKMHPDYATPPAR
CCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCHHHHHHHHHHCCCCCEECCCCCCCHHH
LSRLNEIFARIEQWTMTKTKFEAMEILNADDIPCGPILSMKELAEDQSLRATGTIVEVDH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCEECCCEEECCC
PTRGKYLSVGNPIKLSDSPTEVKRSPLLGEHTDEILRDVLGYSDAHVAEIHDSGATAPPR
CCCCCEEECCCCEEECCCHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCH
KQAAE
HCCCC
>Mature Secondary Structure 
TKALDGVRVLDFTHVQSGPTCTQLLAWFGADVIKVERPGSGDITRGQLQDIPKVDSLYF
CCCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHCCCCHHHHHH
TMLNHNKRSITLDTKNPKGKEVLTALIRTCDVLVENFGPGVLDRMGFTWEKIQEINPRMI
HEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHCCCEEE
VASIKGFGPGPYEDCKVYENVAQCTGGAASTTGFREGLPLVTGAQIGDSGTGLHLALGIV
EEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHCCCCEEECCCCCCCCCCHHHHHHHH
TALYQRHHTGRGQRVTAAMQDGVLNLCRVKLRDQQRLDHGPLKEYSQFGEGIPFGDAVPR
HHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCC
AGNDSGGGQPGRILKCKGWEQDPNAYIYVITQAPVWEKICDVIGETGWKMHPDYATPPAR
CCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCHHHHHHHHHHCCCCCEECCCCCCCHHH
LSRLNEIFARIEQWTMTKTKFEAMEILNADDIPCGPILSMKELAEDQSLRATGTIVEVDH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCEECCCEEECCC
PTRGKYLSVGNPIKLSDSPTEVKRSPLLGEHTDEILRDVLGYSDAHVAEIHDSGATAPPR
CCCCCEEECCCCEEECCCHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCH
KQAAE
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA