| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is oxlT [H]
Identifier: 192290545
GI number: 192290545
Start: 2332511
End: 2333803
Strand: Reverse
Name: oxlT [H]
Synonym: Rpal_2154
Alternate gene names: 192290545
Gene position: 2333803-2332511 (Counterclockwise)
Preceding gene: 192290546
Following gene: 192290544
Centisome position: 40.63
GC content: 64.04
Gene sequence:
>1293_bases ATGACGGACACGGTGCACGGGGTGGCCGCCGCGCAGACGCGGCGCGTGAGTGAGAGCTATCGCTGGACGCAACTCGCCAT CGGCGTCGGCGCGATGGTGATGATCGCCAACTACCAATACGGCTGGACGTTCTTCGTCCCCGACATTCAGAAAACCTTCG GCTGGGACCGCGCCTCGATCCAATGGGCATTCACCCTCTTCGTATTGTTCGAGACCTGGCTGGTGCCGATCGAGGGCTGG TTCGTGGACAAATACGGCCCGCGTCTGGTGGTGCTGATCGGCGGCATCCTGTGTGCGCTCGGCTGGGCGATCAACGCGCA GGCGACGACGCTGTCGGGTTTCTACCTCGGCATGATCGTCGCGGGCATCGGCGCTGGTGCGGTCTATGGCACCTGCGTGG GCAACGCGCTGAAATGGTTTCCGGACAAGCGCGGATTAGCGGCCGGATTGACGGCGGCGGGCTTCGGGGCCGGCTCGGCG CTCACGGTGGCGCCGATCCAGGCGATGATCCGCGACTCCGGCTTTCAGACCACCTTCATGTATTTCGGTCTCGGCCAGGG CATCGTGATCGTGTTTCTGTCGCTGCTGCTGCTCGCGCCGAAGCCGGGACAGGTGCCGTCCCCGACCCGCAACGCCAACG TCTTCCAGACGCGTCGCGACTACCGTCCGACCGAAGTGCTGCGCCAGCCGGTGTTCTGGCTGATGTACTTCATGTTCGTG ATCGTCGGTGCCGGCGGGTTGATGGTCACCGCCAATCTGAAGCCGATCGCCGCCGACTGGAAGATCGCCGACACGCCCGT CACGCTGATGGCGATGACCATGACGGCAGTGACCTTCGCAGCCACCTTCGATCGCATCCTCAACGGCCTGACGCGGCCGT TCTTCGGCTGGATCTCGGACAAGATCGGCCGCGAGAATACGATGTTCATCGCGTTCGGGCTCGAAGGCATCGGCATCTAC GCGCTGTATGCGCTGGGTCAGGATCCGGTGTGGTTCGTGCTGCTGTCGGGGCTGGTGTTCTTCGCCTGGGGCGAGATCTA CTCGCTGTTTCCCTCAACCTGCACCGACACCTTCGGGTCGAAGTTCGCCGCCACCAATGCGGGCCTGCTGTACACCGCGA AGGGCACCGCGGCGCTGCTGGTGCCATTCGCCAATTCGCTGCAGCAATCCAGCGGCAGTTGGGATCTGGTGTTCCTGATC GCTGCCGCCGCCAACATCCTGGCGTCGCTGTTGGCGCTGCTGGTGCTCAAGCCATGGCGGCGCAGCGTCGTCGCCAAAAG CGAAATGGTCTGA
Upstream 100 bases:
>100_bases ACAAGTCACGTCGTTATTTCCCTCCTTGCGCCTGGTGATTAGCACGATCACAATGGCGACGGTACGGCTCCCGACAGAGG CGCCGGCTCACGGAGGAAAC
Downstream 100 bases:
>100_bases TCGACGCGGCGGGAGCGCACGCGTCGCAGGCAAATCTGGTCTCACCGCGGCGTGGCCGAATGGCCACGCCTGTCTTGTCG TCTGTCTGATGGGAAATCGC
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: OFA; Oxalate:formate antiport protein; Oxalate:formate exchange protein [H]
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MTDTVHGVAAAQTRRVSESYRWTQLAIGVGAMVMIANYQYGWTFFVPDIQKTFGWDRASIQWAFTLFVLFETWLVPIEGW FVDKYGPRLVVLIGGILCALGWAINAQATTLSGFYLGMIVAGIGAGAVYGTCVGNALKWFPDKRGLAAGLTAAGFGAGSA LTVAPIQAMIRDSGFQTTFMYFGLGQGIVIVFLSLLLLAPKPGQVPSPTRNANVFQTRRDYRPTEVLRQPVFWLMYFMFV IVGAGGLMVTANLKPIAADWKIADTPVTLMAMTMTAVTFAATFDRILNGLTRPFFGWISDKIGRENTMFIAFGLEGIGIY ALYALGQDPVWFVLLSGLVFFAWGEIYSLFPSTCTDTFGSKFAATNAGLLYTAKGTAALLVPFANSLQQSSGSWDLVFLI AAAANILASLLALLVLKPWRRSVVAKSEMV
Sequences:
>Translated_430_residues MTDTVHGVAAAQTRRVSESYRWTQLAIGVGAMVMIANYQYGWTFFVPDIQKTFGWDRASIQWAFTLFVLFETWLVPIEGW FVDKYGPRLVVLIGGILCALGWAINAQATTLSGFYLGMIVAGIGAGAVYGTCVGNALKWFPDKRGLAAGLTAAGFGAGSA LTVAPIQAMIRDSGFQTTFMYFGLGQGIVIVFLSLLLLAPKPGQVPSPTRNANVFQTRRDYRPTEVLRQPVFWLMYFMFV IVGAGGLMVTANLKPIAADWKIADTPVTLMAMTMTAVTFAATFDRILNGLTRPFFGWISDKIGRENTMFIAFGLEGIGIY ALYALGQDPVWFVLLSGLVFFAWGEIYSLFPSTCTDTFGSKFAATNAGLLYTAKGTAALLVPFANSLQQSSGSWDLVFLI AAAANILASLLALLVLKPWRRSVVAKSEMV >Mature_429_residues TDTVHGVAAAQTRRVSESYRWTQLAIGVGAMVMIANYQYGWTFFVPDIQKTFGWDRASIQWAFTLFVLFETWLVPIEGWF VDKYGPRLVVLIGGILCALGWAINAQATTLSGFYLGMIVAGIGAGAVYGTCVGNALKWFPDKRGLAAGLTAAGFGAGSAL TVAPIQAMIRDSGFQTTFMYFGLGQGIVIVFLSLLLLAPKPGQVPSPTRNANVFQTRRDYRPTEVLRQPVFWLMYFMFVI VGAGGLMVTANLKPIAADWKIADTPVTLMAMTMTAVTFAATFDRILNGLTRPFFGWISDKIGRENTMFIAFGLEGIGIYA LYALGQDPVWFVLLSGLVFFAWGEIYSLFPSTCTDTFGSKFAATNAGLLYTAKGTAALLVPFANSLQQSSGSWDLVFLIA AAANILASLLALLVLKPWRRSVVAKSEMV
Specific function: Anion transporter that carries out the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation, at the plasma membrane, and in doing so catalyzes the vectorial portion of a proton-motive metabolic cycle that drives ATP
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. OFA (TC 2.A.1.11) family [H]
Homologues:
Organism=Homo sapiens, GI24431958, Length=413, Percent_Identity=23.728813559322, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1789969, Length=342, Percent_Identity=26.3157894736842, Blast_Score=102, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004741 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46717; Mature: 46586
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTVHGVAAAQTRRVSESYRWTQLAIGVGAMVMIANYQYGWTFFVPDIQKTFGWDRASI CCCCCHHHHHHHHHHHHHHCCHHHHHHHHCEEEEEEECCCCEEEEECCHHHHCCCCCCHH QWAFTLFVLFETWLVPIEGWFVDKYGPRLVVLIGGILCALGWAINAQATTLSGFYLGMIV HHHHHHHHHHHHHHHCCCCEEECCCCCEEHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHH AGIGAGAVYGTCVGNALKWFPDKRGLAAGLTAAGFGAGSALTVAPIQAMIRDSGFQTTFM HHHCCCHHHHHHHHHHHHHCCCCCCCHHCCHHCCCCCCCEEHHHHHHHHHHCCCCCEEEE YFGLGQGIVIVFLSLLLLAPKPGQVPSPTRNANVFQTRRDYRPTEVLRQPVFWLMYFMFV EEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHH IVGAGGLMVTANLKPIAADWKIADTPVTLMAMTMTAVTFAATFDRILNGLTRPFFGWISD HHCCCCEEEEECCCEEECCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIGRENTMFIAFGLEGIGIYALYALGQDPVWFVLLSGLVFFAWGEIYSLFPSTCTDTFGS HCCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC KFAATNAGLLYTAKGTAALLVPFANSLQQSSGSWDLVFLIAAAANILASLLALLVLKPWR CCEECCCCEEEEECCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHH RSVVAKSEMV HHHHHHHCCC >Mature Secondary Structure TDTVHGVAAAQTRRVSESYRWTQLAIGVGAMVMIANYQYGWTFFVPDIQKTFGWDRASI CCCCHHHHHHHHHHHHHHCCHHHHHHHHCEEEEEEECCCCEEEEECCHHHHCCCCCCHH QWAFTLFVLFETWLVPIEGWFVDKYGPRLVVLIGGILCALGWAINAQATTLSGFYLGMIV HHHHHHHHHHHHHHHCCCCEEECCCCCEEHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHH AGIGAGAVYGTCVGNALKWFPDKRGLAAGLTAAGFGAGSALTVAPIQAMIRDSGFQTTFM HHHCCCHHHHHHHHHHHHHCCCCCCCHHCCHHCCCCCCCEEHHHHHHHHHHCCCCCEEEE YFGLGQGIVIVFLSLLLLAPKPGQVPSPTRNANVFQTRRDYRPTEVLRQPVFWLMYFMFV EEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHH IVGAGGLMVTANLKPIAADWKIADTPVTLMAMTMTAVTFAATFDRILNGLTRPFFGWISD HHCCCCEEEEECCCEEECCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIGRENTMFIAFGLEGIGIYALYALGQDPVWFVLLSGLVFFAWGEIYSLFPSTCTDTFGS HCCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC KFAATNAGLLYTAKGTAALLVPFANSLQQSSGSWDLVFLIAAAANILASLLALLVLKPWR CCEECCCCEEEEECCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHH RSVVAKSEMV HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8636101; 9651403; 11919184; 11113128; 11274108; 11500368 [H]