| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is qor [H]
Identifier: 192290541
GI number: 192290541
Start: 2328242
End: 2329210
Strand: Reverse
Name: qor [H]
Synonym: Rpal_2150
Alternate gene names: 192290541
Gene position: 2329210-2328242 (Counterclockwise)
Preceding gene: 192290542
Following gene: 192290540
Centisome position: 40.55
GC content: 68.01
Gene sequence:
>969_bases ATGAAAGCCTATGTCTACGGCGCCGGTGGCGCCGCCATCACCGAAGTCGACAAGCCGGCGCCGAAAGGTCCGCAAGTCCT GATCCGGGTCCGCGCCTGCGGGCTCAACCGCGCCGACCTCGGCATGACCAAGGGCCACGCCCACGGCGCCGCTGGCGGCC TCGGTGCGGTGCTGGGCATGGAATTCGCCGGCGAAGTCGAAGCGCTTGGCGATGAGGCCTATGGCTGCAAGATCGGCGAC CGCGTGATGGGCTCGACTGCCGGAGCGTTCGGCGAGTACACCCTCGCCGATCACGGCCGGCTGCTGCCGATCCCGGACGG CCTGAGCTTCGAAGAGGCCGCCACCCTGCCCGTCGCCCTCACCACGATGCACAATGCGGTGGTGGCGATCGGCAAGCTGC GCTCGGGGCAGTCGGTGCTGGTGCAAGGCGCCAGCTCCGGCGTCGGGCTGATGGCGATGCAGATCGCCAAGCTCAAGGGC GCCCGCAAGGTGATCGGCTCGTCGACCGACAAGGGCCGGCGCGACACGCTGCATCAGTTCGGCGCCGATCTGGCGATCGA CTCCTCCGGCGACGGCTGGGTCGATCAGGTGCTCGCCGCCACCGGCGGCGCCGGCGTCGATCTGGTGATCGACCAGGTCT CCGGCAAGGTCGCCAACCAGAACCTCGCCGCCACCCGCGTGCTCGGCCGCATCGTCAATGTCGGCCGGCTCGGCGGCACC CATGCGGATTTCAATTTCGACCTGCATGCGGCACGCCGGATCGACTATGTCGGCGTCACCTTCCGCAGCCGCAGCGTCGA AGAGGTCCGCGAAATCTTCCGCCAGGTCCGCGGCGACATCTGGCCGGCGGTCGAAGCCCGCGTTTTGAAGCTGCCGATCG ACAAGGTGTTTCCGTTCACCGAGATCGGTGCGGCATTCGCCCACATGGAAGCCAACCGCCACCTCGGCAAGATCGTGGTG ACGATCTGA
Upstream 100 bases:
>100_bases CATCCGCGGCCGGCTCGAAGCGCTGCTCTCGGGCGGCGCGCGCGAGGCCGCGGAGTAAGACGCGCGCCGGATCGGCGCAG CGAAACAGGACGAGCTTGCG
Downstream 100 bases:
>100_bases CCGGTTTCACCCCGGCCGCGCCTCCATTTTACTGAGACTAATTCGCAGCTACTGCAAACCGGCCCGTTACCACCAGGGTA ACGGGTCGCGCGCCTTTCCG
Product: alcohol dehydrogenase zinc-binding domain-containing protein
Products: NA
Alternate protein names: NADPH:quinone reductase [H]
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MKAYVYGAGGAAITEVDKPAPKGPQVLIRVRACGLNRADLGMTKGHAHGAAGGLGAVLGMEFAGEVEALGDEAYGCKIGD RVMGSTAGAFGEYTLADHGRLLPIPDGLSFEEAATLPVALTTMHNAVVAIGKLRSGQSVLVQGASSGVGLMAMQIAKLKG ARKVIGSSTDKGRRDTLHQFGADLAIDSSGDGWVDQVLAATGGAGVDLVIDQVSGKVANQNLAATRVLGRIVNVGRLGGT HADFNFDLHAARRIDYVGVTFRSRSVEEVREIFRQVRGDIWPAVEARVLKLPIDKVFPFTEIGAAFAHMEANRHLGKIVV TI
Sequences:
>Translated_322_residues MKAYVYGAGGAAITEVDKPAPKGPQVLIRVRACGLNRADLGMTKGHAHGAAGGLGAVLGMEFAGEVEALGDEAYGCKIGD RVMGSTAGAFGEYTLADHGRLLPIPDGLSFEEAATLPVALTTMHNAVVAIGKLRSGQSVLVQGASSGVGLMAMQIAKLKG ARKVIGSSTDKGRRDTLHQFGADLAIDSSGDGWVDQVLAATGGAGVDLVIDQVSGKVANQNLAATRVLGRIVNVGRLGGT HADFNFDLHAARRIDYVGVTFRSRSVEEVREIFRQVRGDIWPAVEARVLKLPIDKVFPFTEIGAAFAHMEANRHLGKIVV TI >Mature_322_residues MKAYVYGAGGAAITEVDKPAPKGPQVLIRVRACGLNRADLGMTKGHAHGAAGGLGAVLGMEFAGEVEALGDEAYGCKIGD RVMGSTAGAFGEYTLADHGRLLPIPDGLSFEEAATLPVALTTMHNAVVAIGKLRSGQSVLVQGASSGVGLMAMQIAKLKG ARKVIGSSTDKGRRDTLHQFGADLAIDSSGDGWVDQVLAATGGAGVDLVIDQVSGKVANQNLAATRVLGRIVNVGRLGGT HADFNFDLHAARRIDYVGVTFRSRSVEEVREIFRQVRGDIWPAVEARVLKLPIDKVFPFTEIGAAFAHMEANRHLGKIVV TI
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI22538446, Length=318, Percent_Identity=31.7610062893082, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI22538444, Length=318, Percent_Identity=31.7610062893082, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI194239674, Length=298, Percent_Identity=29.8657718120805, Blast_Score=125, Evalue=7e-29, Organism=Homo sapiens, GI13236495, Length=298, Percent_Identity=29.8657718120805, Blast_Score=125, Evalue=7e-29, Organism=Homo sapiens, GI18379349, Length=318, Percent_Identity=27.6729559748428, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI194239676, Length=186, Percent_Identity=33.8709677419355, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI24308257, Length=326, Percent_Identity=26.6871165644172, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI41872631, Length=320, Percent_Identity=27.8125, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI28557745, Length=222, Percent_Identity=30.6306306306306, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI197927207, Length=177, Percent_Identity=28.2485875706215, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI47519420, Length=339, Percent_Identity=25.0737463126844, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI87082125, Length=365, Percent_Identity=26.8493150684932, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1790485, Length=300, Percent_Identity=25.6666666666667, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17507255, Length=227, Percent_Identity=30.8370044052863, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI71987554, Length=239, Percent_Identity=28.8702928870293, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17536829, Length=155, Percent_Identity=32.9032258064516, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6319520, Length=320, Percent_Identity=26.5625, Blast_Score=97, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6323961, Length=337, Percent_Identity=26.7062314540059, Blast_Score=71, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6324486, Length=337, Percent_Identity=25.8160237388724, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI19920632, Length=301, Percent_Identity=26.578073089701, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI221330659, Length=301, Percent_Identity=26.578073089701, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI24581345, Length=276, Percent_Identity=25.7246376811594, Blast_Score=78, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 33676; Mature: 33676
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAYVYGAGGAAITEVDKPAPKGPQVLIRVRACGLNRADLGMTKGHAHGAAGGLGAVLGM CCEEEEECCCCEEECCCCCCCCCCEEEEEEEECCCCHHHCCCCCCCCCCCCCCHHHHHHH EFAGEVEALGDEAYGCKIGDRVMGSTAGAFGEYTLADHGRLLPIPDGLSFEEAATLPVAL HHCCCHHHCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCEEEECCCCCCHHHHCCCCEEE TTMHNAVVAIGKLRSGQSVLVQGASSGVGLMAMQIAKLKGARKVIGSSTDKGRRDTLHQF HHHHHHHHEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHC GADLAIDSSGDGWVDQVLAATGGAGVDLVIDQVSGKVANQNLAATRVLGRIVNVGRLGGT CCCEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCC HADFNFDLHAARRIDYVGVTFRSRSVEEVREIFRQVRGDIWPAVEARVLKLPIDKVFPFT CCCCCEEEHHHHEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHCCHH EIGAAFAHMEANRHLGKIVVTI HHHHHHHHHHCCCCCCEEEEEC >Mature Secondary Structure MKAYVYGAGGAAITEVDKPAPKGPQVLIRVRACGLNRADLGMTKGHAHGAAGGLGAVLGM CCEEEEECCCCEEECCCCCCCCCCEEEEEEEECCCCHHHCCCCCCCCCCCCCCHHHHHHH EFAGEVEALGDEAYGCKIGDRVMGSTAGAFGEYTLADHGRLLPIPDGLSFEEAATLPVAL HHCCCHHHCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCEEEECCCCCCHHHHCCCCEEE TTMHNAVVAIGKLRSGQSVLVQGASSGVGLMAMQIAKLKGARKVIGSSTDKGRRDTLHQF HHHHHHHHEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHC GADLAIDSSGDGWVDQVLAATGGAGVDLVIDQVSGKVANQNLAATRVLGRIVNVGRLGGT CCCEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCC HADFNFDLHAARRIDYVGVTFRSRSVEEVREIFRQVRGDIWPAVEARVLKLPIDKVFPFT CCCCCEEEHHHHEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHCCHH EIGAAFAHMEANRHLGKIVVTI HHHHHHHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]