| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290536
Identifier: 192290536
GI number: 192290536
Start: 2318645
End: 2318896
Strand: Reverse
Name: 192290536
Synonym: Rpal_2145
Alternate gene names: NA
Gene position: 2318896-2318645 (Counterclockwise)
Preceding gene: 192290537
Following gene: 192290530
Centisome position: 40.37
GC content: 65.08
Gene sequence:
>252_bases GTGGACTTTAGCACCGCCTTCCACCAGACCTCGGTTTGGCTGTTTCGACTGGCGTTCGTCGGCGCTGCGGTCGGTATCGG CTACATCGTCATGACCAAGCAGGACGAGGCGACGGCGACGGCGCCCGCCTCGATCGCGGCCCCGATCGACGATGGGGTGA CCGGCTGCAAACCGATCGGCCAGACTGCGAGCGGCAAGCTGGTGTATTCGATGGATTGCGACCAGCTGCCGGCAGCCGAC GCCGCCAAGTAA
Upstream 100 bases:
>100_bases ACGAGAACGATTCAAGCGAAGCTCTAGCCTAAAATCCGGCTTGTCCGCGTTCGGAACGGCCGTGTAAGAGCGAACCGACG ATTGATGCGAGGAGCCCAGC
Downstream 100 bases:
>100_bases TCGCGCCGGACCGCCGCAACTCACCGATCGAGAGAACTGCGGCGCGCGAGACGTTGCCCTAAGCGTCCTCGCCGCCGATC AGGCGGTTGAAGATCGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MDFSTAFHQTSVWLFRLAFVGAAVGIGYIVMTKQDEATATAPASIAAPIDDGVTGCKPIGQTASGKLVYSMDCDQLPAAD AAK
Sequences:
>Translated_83_residues MDFSTAFHQTSVWLFRLAFVGAAVGIGYIVMTKQDEATATAPASIAAPIDDGVTGCKPIGQTASGKLVYSMDCDQLPAAD AAK >Mature_83_residues MDFSTAFHQTSVWLFRLAFVGAAVGIGYIVMTKQDEATATAPASIAAPIDDGVTGCKPIGQTASGKLVYSMDCDQLPAAD AAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8583; Mature: 8583
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFSTAFHQTSVWLFRLAFVGAAVGIGYIVMTKQDEATATAPASIAAPIDDGVTGCKPIG CCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCC QTASGKLVYSMDCDQLPAADAAK CCCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure MDFSTAFHQTSVWLFRLAFVGAAVGIGYIVMTKQDEATATAPASIAAPIDDGVTGCKPIG CCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCC QTASGKLVYSMDCDQLPAADAAK CCCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA