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The map label for this gene is fdxD [H]

Identifier: 192290530

GI number: 192290530

Start: 2308631

End: 2309539

Strand: Reverse

Name: fdxD [H]

Synonym: Rpal_2139

Alternate gene names: 192290530

Gene position: 2309539-2308631 (Counterclockwise)

Preceding gene: 192290536

Following gene: 192290529

Centisome position: 40.21

GC content: 65.24

Gene sequence:

>909_bases
GTGGCGAATATTACCTTCTCGTCCCCGGTTATGGCCAAGGACGTGACCGTGTATGCGGTGGCGGGCGATCGCGGGACCAT
TCTGGCGGTTGCGAAATCGCACAGCATTCCGATCCCGTTCGACTGTCAGGATGGCGAATGCGGCTCCTGCCTGGTGCAGG
TCGAGCATTTCAATCCGAAGGCCAAGGCTGCGGTGGCGCTGACCGAAAAGGAAAAGGAAGTGCTGCGCCAGCTCGGCAAG
ATCACCAAGGAGGAGATCGTCGACGCCGAAGTCAACGACATCCCGCCGCGCTACCGCCTCGCCTGCCAGTGCTTCGTCCG
CAATGAAGACATCCTGGTCAAGTTCGAGGGCGACAAGACCAAGCCGCAGCGCCTCGCGGTGACACCGGCCGCTGCGCACT
ACAAGGGCGGCATGGAGATCAACACCCCGCAGGAATTCTTCAGCTACGCCGCGAAGGTCGAGGAAGACGCAGCGCTGCAC
TACGACAGCCTCGCCAAGGCGATGGCGGACGCCGGCAACGCGCCGGTGGCGAAGCTGTTCGCGCAGCTCGCCGAGTTCTC
GCGGCTGCATCTGGCCGAAGTGAAGTCGCGCGCCGGCAGCATCGACCTCAGCAAGAGCGTGCCGCCGGACTACGCCTGGC
CCGACCACGCGACGCCGGAGCGCGCCGCGGTGTGGGCCTCGGACACCACGCTCACACGTCTCGGCGCGCTGAAGGCGGCG
CTGCAGGGCGAGCGCCGCGGCTACGAGTTTTATCGTGCGGTCGAAGCAACCACCAAGTCGCCCGAGGTCGCCGCGGCGGC
CAAGGAATTCGTCAACGAAGAAGCCGAGCACGTCCGCATTCTCGAGGCCTGGATCACCCAGGAGGAATGGTCGCTCAAGC
ACGCCGCCAAGGCTGCGGAGAACGCCTGA

Upstream 100 bases:

>100_bases
TGAATTACTTAGTGATCGTGCGTGGCCTGGTTCTTGCCAAGGGGCAGCCGGAGGGCGCCGGCACGGCGTCGATCAACCCC
TGACGACAGGAGAGTACGAC

Downstream 100 bases:

>100_bases
CGACAGCGACGGCCGTCGCCACCCCGGCGACGGCCGAACAAGGAGAGACGACGATGGAAACAGTCGAAGAGTTTCTGGCG
CATTCGATCAAGCTGGAGCA

Product: ferredoxin

Products: NA

Alternate protein names: Ferredoxin V; FdV; Ferredoxin, plant-type [H]

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MANITFSSPVMAKDVTVYAVAGDRGTILAVAKSHSIPIPFDCQDGECGSCLVQVEHFNPKAKAAVALTEKEKEVLRQLGK
ITKEEIVDAEVNDIPPRYRLACQCFVRNEDILVKFEGDKTKPQRLAVTPAAAHYKGGMEINTPQEFFSYAAKVEEDAALH
YDSLAKAMADAGNAPVAKLFAQLAEFSRLHLAEVKSRAGSIDLSKSVPPDYAWPDHATPERAAVWASDTTLTRLGALKAA
LQGERRGYEFYRAVEATTKSPEVAAAAKEFVNEEAEHVRILEAWITQEEWSLKHAAKAAENA

Sequences:

>Translated_302_residues
MANITFSSPVMAKDVTVYAVAGDRGTILAVAKSHSIPIPFDCQDGECGSCLVQVEHFNPKAKAAVALTEKEKEVLRQLGK
ITKEEIVDAEVNDIPPRYRLACQCFVRNEDILVKFEGDKTKPQRLAVTPAAAHYKGGMEINTPQEFFSYAAKVEEDAALH
YDSLAKAMADAGNAPVAKLFAQLAEFSRLHLAEVKSRAGSIDLSKSVPPDYAWPDHATPERAAVWASDTTLTRLGALKAA
LQGERRGYEFYRAVEATTKSPEVAAAAKEFVNEEAEHVRILEAWITQEEWSLKHAAKAAENA
>Mature_301_residues
ANITFSSPVMAKDVTVYAVAGDRGTILAVAKSHSIPIPFDCQDGECGSCLVQVEHFNPKAKAAVALTEKEKEVLRQLGKI
TKEEIVDAEVNDIPPRYRLACQCFVRNEDILVKFEGDKTKPQRLAVTPAAAHYKGGMEINTPQEFFSYAAKVEEDAALHY
DSLAKAMADAGNAPVAKLFAQLAEFSRLHLAEVKSRAGSIDLSKSVPPDYAWPDHATPERAAVWASDTTLTRLGALKAAL
QGERRGYEFYRAVEATTKSPEVAAAAKEFVNEEAEHVRILEAWITQEEWSLKHAAKAAENA

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. This ferredoxin probably participates in nitrogen fixation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 33029; Mature: 32897

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANITFSSPVMAKDVTVYAVAGDRGTILAVAKSHSIPIPFDCQDGECGSCLVQVEHFNPK
CCCCCCCCCCEECCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCC
AKAAVALTEKEKEVLRQLGKITKEEIVDAEVNDIPPRYRLACQCFVRNEDILVKFEGDKT
HHEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEEEEECCCCEEEEECCCCC
KPQRLAVTPAAAHYKGGMEINTPQEFFSYAAKVEEDAALHYDSLAKAMADAGNAPVAKLF
CCCEEEECCCHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHH
AQLAEFSRLHLAEVKSRAGSIDLSKSVPPDYAWPDHATPERAAVWASDTTLTRLGALKAA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHH
LQGERRGYEFYRAVEATTKSPEVAAAAKEFVNEEAEHVRILEAWITQEEWSLKHAAKAAE
HHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHC
NA
CC
>Mature Secondary Structure 
ANITFSSPVMAKDVTVYAVAGDRGTILAVAKSHSIPIPFDCQDGECGSCLVQVEHFNPK
CCCCCCCCCEECCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCC
AKAAVALTEKEKEVLRQLGKITKEEIVDAEVNDIPPRYRLACQCFVRNEDILVKFEGDKT
HHEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEEEEECCCCEEEEECCCCC
KPQRLAVTPAAAHYKGGMEINTPQEFFSYAAKVEEDAALHYDSLAKAMADAGNAPVAKLF
CCCEEEECCCHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHH
AQLAEFSRLHLAEVKSRAGSIDLSKSVPPDYAWPDHATPERAAVWASDTTLTRLGALKAA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHH
LQGERRGYEFYRAVEATTKSPEVAAAAKEFVNEEAEHVRILEAWITQEEWSLKHAAKAAE
HHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHC
NA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7693551 [H]