Click here to switch to the map view.

The map label for this gene is 192290492

Identifier: 192290492

GI number: 192290492

Start: 2273187

End: 2273858

Strand: Reverse

Name: 192290492

Synonym: Rpal_2100

Alternate gene names: NA

Gene position: 2273858-2273187 (Counterclockwise)

Preceding gene: 192290496

Following gene: 192290491

Centisome position: 39.59

GC content: 56.85

Gene sequence:

>672_bases
GTGCCACCTCCAATTCCGACAGCCATTTTCCACATCACTGCGATCGCCAATCTGGACTCGATCGCGAAGCAGGGCGCCCT
GCTTTCAAAGAACGAGGCTGCGGCGCGCGGATTGGTCGCGGCAAATATCGCTTATGACCATATTCAGGGACGCCGCGCCG
TACGCACGGTGCCCATCGCGCCCGGCGGAACGTTGCACGATTACGTGCCGTTCTATTTTGCGCCACGCTCCCCGATGTTG
TTCACCATCAACCAAGGCAACGTACCCGACTGTATCTATCGACAGGACGATATTGTACATCTCGCGACGACCGCTCAAAC
CGTCGCGGACACGGGGCAGCAGATTGTATTCTCAGACATCCACGCGGCCCTGGATTACGCTAGGTTTTTCAGTGATCTCG
GCAGCCTGACGGAGATCGACTGGAGAATCTTCTTCGAGCCGCCACGTCTCGAAGGCTATTGTAAATTCTGGCAAAATCGC
CAGATTCCCATTCATCATTTACGGCGTCTGGAGATTCGGCAGGCGGAGTTCCTTGTGCATGGCGAGCTGCCGATTGCCGC
GATCTCAGAAATTGGCGTAAAAACCGCCCAAGCAGCTGCGCAAGTCGAACAGGCAGTCGCTGGTTCTGGATGGACTCCCA
CGGTCAGGGTGGTGCCCGGCTGGTACTTCTAA

Upstream 100 bases:

>100_bases
CCCGCACTCAAATCAGTAACGTCGCCAGAGAGACCAAATCTGCCGGAACCTAGCAACGTCTGCTATAATTCATAGAACTA
AAGCGTGCTAGGAAGCTCAC

Downstream 100 bases:

>100_bases
CGGATAAGGCAATGGCGATCAGGCTAGTGACGGGCAACCTACTGGAGCGGCGCGTCGACGCGATCGTCAACACGGTCAAC
ACTGTCGGCGTGATGGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MPPPIPTAIFHITAIANLDSIAKQGALLSKNEAAARGLVAANIAYDHIQGRRAVRTVPIAPGGTLHDYVPFYFAPRSPML
FTINQGNVPDCIYRQDDIVHLATTAQTVADTGQQIVFSDIHAALDYARFFSDLGSLTEIDWRIFFEPPRLEGYCKFWQNR
QIPIHHLRRLEIRQAEFLVHGELPIAAISEIGVKTAQAAAQVEQAVAGSGWTPTVRVVPGWYF

Sequences:

>Translated_223_residues
MPPPIPTAIFHITAIANLDSIAKQGALLSKNEAAARGLVAANIAYDHIQGRRAVRTVPIAPGGTLHDYVPFYFAPRSPML
FTINQGNVPDCIYRQDDIVHLATTAQTVADTGQQIVFSDIHAALDYARFFSDLGSLTEIDWRIFFEPPRLEGYCKFWQNR
QIPIHHLRRLEIRQAEFLVHGELPIAAISEIGVKTAQAAAQVEQAVAGSGWTPTVRVVPGWYF
>Mature_222_residues
PPPIPTAIFHITAIANLDSIAKQGALLSKNEAAARGLVAANIAYDHIQGRRAVRTVPIAPGGTLHDYVPFYFAPRSPMLF
TINQGNVPDCIYRQDDIVHLATTAQTVADTGQQIVFSDIHAALDYARFFSDLGSLTEIDWRIFFEPPRLEGYCKFWQNRQ
IPIHHLRRLEIRQAEFLVHGELPIAAISEIGVKTAQAAAQVEQAVAGSGWTPTVRVVPGWYF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24700; Mature: 24569

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPPIPTAIFHITAIANLDSIAKQGALLSKNEAAARGLVAANIAYDHIQGRRAVRTVPIA
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEHHHHHHHCCCCEEEEEECC
PGGTLHDYVPFYFAPRSPMLFTINQGNVPDCIYRQDDIVHLATTAQTVADTGQQIVFSDI
CCCCHHCCCCEEECCCCCEEEEECCCCCCCCEECCCCEEEEEHHHHHHHHCCCHHHHHHH
HAALDYARFFSDLGSLTEIDWRIFFEPPRLEGYCKFWQNRQIPIHHLRRLEIRQAEFLVH
HHHHHHHHHHHHHCCCEEECEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHEEEEEE
GELPIAAISEIGVKTAQAAAQVEQAVAGSGWTPTVRVVPGWYF
CCCCHHHHHHHCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
>Mature Secondary Structure 
PPPIPTAIFHITAIANLDSIAKQGALLSKNEAAARGLVAANIAYDHIQGRRAVRTVPIA
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEHHHHHHHCCCCEEEEEECC
PGGTLHDYVPFYFAPRSPMLFTINQGNVPDCIYRQDDIVHLATTAQTVADTGQQIVFSDI
CCCCHHCCCCEEECCCCCEEEEECCCCCCCCEECCCCEEEEEHHHHHHHHCCCHHHHHHH
HAALDYARFFSDLGSLTEIDWRIFFEPPRLEGYCKFWQNRQIPIHHLRRLEIRQAEFLVH
HHHHHHHHHHHHHCCCEEECEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHEEEEEE
GELPIAAISEIGVKTAQAAAQVEQAVAGSGWTPTVRVVPGWYF
CCCCHHHHHHHCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA