| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290427
Identifier: 192290427
GI number: 192290427
Start: 2206918
End: 2207247
Strand: Reverse
Name: 192290427
Synonym: Rpal_2034
Alternate gene names: NA
Gene position: 2207247-2206918 (Counterclockwise)
Preceding gene: 192290428
Following gene: 192290426
Centisome position: 38.43
GC content: 63.33
Gene sequence:
>330_bases ATGTTCGTGATCCATCACAGCGATTGCGGGATGCAGCTGTTCACCGGCGAGGTGATCGCCGACCTGCTCGAGGACAATCT CGAGACCGCCAGCTTCGACGGCCAGCACTGGAGCAATCCAAAGCACGGCGGCGGCTCTGTCGCCGGTCATTTCGTGCACT GGCATACGTTTCAGGACAACGCCAAGAGCGTCACCGAGGACGTCGCGCGAATTCGCAGCCATCCGCTGGTGCCGAAGCAC ATCCCGATCTACGGCTTCATCTACGACGTGAAGACCGGCCGGCTGGACGAGGTCGCAGAGGCCAGCTCCGCCGGCAGACC CGCCGCCTGA
Upstream 100 bases:
>100_bases CCGAAGGCGACGCGCACGTCATCCGCAACGCCGGCGGCCGCGCCTCCGACGACGCGATCCGCTCCCTGGTGATCTCCCAC AAGCTGCTCGGCACCCAGGA
Downstream 100 bases:
>100_bases AGCGTCATCAACAGGGAGATCCGCGCGCGCTCATTCCGCGCCGGACTCCCCTCGCTCCTGGCGCCCAATCGTTGTAAACG GGCGCCATGAATTCAGCCCG
Product: carbonic anhydrase
Products: NA
Alternate protein names: Carbonate Dehydratase; Carbonate Hydratase; Carbonic Anhydrase Domain Protein
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MFVIHHSDCGMQLFTGEVIADLLEDNLETASFDGQHWSNPKHGGGSVAGHFVHWHTFQDNAKSVTEDVARIRSHPLVPKH IPIYGFIYDVKTGRLDEVAEASSAGRPAA
Sequences:
>Translated_109_residues MFVIHHSDCGMQLFTGEVIADLLEDNLETASFDGQHWSNPKHGGGSVAGHFVHWHTFQDNAKSVTEDVARIRSHPLVPKH IPIYGFIYDVKTGRLDEVAEASSAGRPAA >Mature_109_residues MFVIHHSDCGMQLFTGEVIADLLEDNLETASFDGQHWSNPKHGGGSVAGHFVHWHTFQDNAKSVTEDVARIRSHPLVPKH IPIYGFIYDVKTGRLDEVAEASSAGRPAA
Specific function: Unknown
COG id: COG0288
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11978; Mature: 11978
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVIHHSDCGMQLFTGEVIADLLEDNLETASFDGQHWSNPKHGGGSVAGHFVHWHTFQDN CEEEECCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCC AKSVTEDVARIRSHPLVPKHIPIYGFIYDVKTGRLDEVAEASSAGRPAA HHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MFVIHHSDCGMQLFTGEVIADLLEDNLETASFDGQHWSNPKHGGGSVAGHFVHWHTFQDN CEEEECCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCC AKSVTEDVARIRSHPLVPKHIPIYGFIYDVKTGRLDEVAEASSAGRPAA HHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA