Click here to switch to the map view.

The map label for this gene is 192290321

Identifier: 192290321

GI number: 192290321

Start: 2078244

End: 2079488

Strand: Reverse

Name: 192290321

Synonym: Rpal_1928

Alternate gene names: NA

Gene position: 2079488-2078244 (Counterclockwise)

Preceding gene: 192290322

Following gene: 192290317

Centisome position: 36.2

GC content: 54.78

Gene sequence:

>1245_bases
ATGTCTGACAAAATCGTACACGAATTATACGCGAGCTTCGATCCTGAGAAACTGGGTGCGGACGACGTTACGCTTTGTAT
GGAATGCGCCAAGCACCCAAGCTTAAAGCGTTTCGTCGAACTGCACGCAATCGACGGGCCGGTCTGCGGGGTCTGCCAGG
AGATAGGCTATCCGTACAAGGCATGCGCGCCCGTACGCAAGCGGGAGCTTAGTAAGCTGATCAAGGCACTCATTCGGTTC
TACTACAATGAATATGAGTACAACCATCATTGGGGCGGCGACTACGGGCCGGAACGCCTCTTGGTGAATCCCAATCCGAT
CCTGGAGAACGCTTCGTCCGCGACACGGACGCGGATTCCCGAACGCACCCATGATTTTCTGTACGCGTTGCTTTCAGCCG
AGCCATACCCCCCCATCGAGGAAGGCATCTCAGTCTATGCGGGGCACGACGATGGAGTCAGGGGAATGAATTTAGCGCTG
AAGGGAGAGACGAGTCCGATCCTTCGCTCTTATGTCGCCCGATTAGCTAACCAGAACCATTTCGATATTGAGCCTGATCT
CCTAGGTTTCCTGGATGAGTTATCCGACCGTATGACACGTGTGGTGTCGGCTGGCACCAGATTCTTTCGGGCGCGAATTG
GCGTTGAAGCGCGATATGCCGATCATTCCGATTTTGGCTGGCGGCGCTCGATCGTTCGGCAACCCTATCGCGGAACAGAG
TTGAGTGCTCCGCCACCTCCGCTCGCATCCGGGGGGAGGTTAAACCGTGCAGGCGTTTCCTTTCTGTATCTTGCTTCCGA
CGCCGCGACCGCAGCCGCCGAGGTTCGACCGCATCCCGGACACTACCTTTCTATCGGTGAGTTCGAATGTCTGCAAAACA
TCAGGATCGCATCACTGGATGCTGGCATCATGCAATACGCTGGGAACGAGCACGAGCTTGAGTTATTTCACTTCCTTTAC
TCAGCGGACCAATTGATGGCGACGCCCGTGCCCCCTGAAAAGACTGCGCGCTATTCGATCACCCAGTTGATTGCAGATTG
TCTCCGGCGAAAAGGCTTTGAGGGTGTGTCGTTCCGAAGCAGTATCGGCGTCGGAAACAATCTTTGTATATTCAAACCAG
AATGGTTTGCGCCCGTGGATGGCAGCGAAGTCGTCCAAAGAGTGAAGTCATTGGCGTATGAACTGGCAGCGACCCCAATG
ATCCTTGAGCCGAATCAAGCCGATCACTTCCGCTTGGACGAGTGA

Upstream 100 bases:

>100_bases
CGTGGCAGTCAACATCGACGAAACCATTCTACGTTCTGGTTGACGATTCAGCTGCAAGCGCTTTTAAGCGCTCGATATCT
CAATCGGCTGGTAACAACGC

Downstream 100 bases:

>100_bases
AGTTGGAACCCGGCGAAGCCCGTTGAAGGCGCAGCGTTGAACCGCAATTCCTCCCATTCGTACCGCAGAGCCGGTATGGG
TCATTTTCAGCCACCTCAGC

Product: RES domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MSDKIVHELYASFDPEKLGADDVTLCMECAKHPSLKRFVELHAIDGPVCGVCQEIGYPYKACAPVRKRELSKLIKALIRF
YYNEYEYNHHWGGDYGPERLLVNPNPILENASSATRTRIPERTHDFLYALLSAEPYPPIEEGISVYAGHDDGVRGMNLAL
KGETSPILRSYVARLANQNHFDIEPDLLGFLDELSDRMTRVVSAGTRFFRARIGVEARYADHSDFGWRRSIVRQPYRGTE
LSAPPPPLASGGRLNRAGVSFLYLASDAATAAAEVRPHPGHYLSIGEFECLQNIRIASLDAGIMQYAGNEHELELFHFLY
SADQLMATPVPPEKTARYSITQLIADCLRRKGFEGVSFRSSIGVGNNLCIFKPEWFAPVDGSEVVQRVKSLAYELAATPM
ILEPNQADHFRLDE

Sequences:

>Translated_414_residues
MSDKIVHELYASFDPEKLGADDVTLCMECAKHPSLKRFVELHAIDGPVCGVCQEIGYPYKACAPVRKRELSKLIKALIRF
YYNEYEYNHHWGGDYGPERLLVNPNPILENASSATRTRIPERTHDFLYALLSAEPYPPIEEGISVYAGHDDGVRGMNLAL
KGETSPILRSYVARLANQNHFDIEPDLLGFLDELSDRMTRVVSAGTRFFRARIGVEARYADHSDFGWRRSIVRQPYRGTE
LSAPPPPLASGGRLNRAGVSFLYLASDAATAAAEVRPHPGHYLSIGEFECLQNIRIASLDAGIMQYAGNEHELELFHFLY
SADQLMATPVPPEKTARYSITQLIADCLRRKGFEGVSFRSSIGVGNNLCIFKPEWFAPVDGSEVVQRVKSLAYELAATPM
ILEPNQADHFRLDE
>Mature_413_residues
SDKIVHELYASFDPEKLGADDVTLCMECAKHPSLKRFVELHAIDGPVCGVCQEIGYPYKACAPVRKRELSKLIKALIRFY
YNEYEYNHHWGGDYGPERLLVNPNPILENASSATRTRIPERTHDFLYALLSAEPYPPIEEGISVYAGHDDGVRGMNLALK
GETSPILRSYVARLANQNHFDIEPDLLGFLDELSDRMTRVVSAGTRFFRARIGVEARYADHSDFGWRRSIVRQPYRGTEL
SAPPPPLASGGRLNRAGVSFLYLASDAATAAAEVRPHPGHYLSIGEFECLQNIRIASLDAGIMQYAGNEHELELFHFLYS
ADQLMATPVPPEKTARYSITQLIADCLRRKGFEGVSFRSSIGVGNNLCIFKPEWFAPVDGSEVVQRVKSLAYELAATPMI
LEPNQADHFRLDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46367; Mature: 46236

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKIVHELYASFDPEKLGADDVTLCMECAKHPSLKRFVELHAIDGPVCGVCQEIGYPYK
CCHHHHHHHHHCCCHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCCHH
ACAPVRKRELSKLIKALIRFYYNEYEYNHHWGGDYGPERLLVNPNPILENASSATRTRIP
HHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHCCCCHHHHHCCC
ERTHDFLYALLSAEPYPPIEEGISVYAGHDDGVRGMNLALKGETSPILRSYVARLANQNH
HHHHHHHHHHHCCCCCCCHHHCCEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCC
FDIEPDLLGFLDELSDRMTRVVSAGTRFFRARIGVEARYADHSDFGWRRSIVRQPYRGTE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHCCCCCCC
LSAPPPPLASGGRLNRAGVSFLYLASDAATAAAEVRPHPGHYLSIGEFECLQNIRIASLD
CCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCEEECCHHHHHHCCEEEHHH
AGIMQYAGNEHELELFHFLYSADQLMATPVPPEKTARYSITQLIADCLRRKGFEGVSFRS
HHHHHHCCCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHH
SIGVGNNLCIFKPEWFAPVDGSEVVQRVKSLAYELAATPMILEPNQADHFRLDE
CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCC
>Mature Secondary Structure 
SDKIVHELYASFDPEKLGADDVTLCMECAKHPSLKRFVELHAIDGPVCGVCQEIGYPYK
CHHHHHHHHHCCCHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCCHH
ACAPVRKRELSKLIKALIRFYYNEYEYNHHWGGDYGPERLLVNPNPILENASSATRTRIP
HHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHCCCCHHHHHCCC
ERTHDFLYALLSAEPYPPIEEGISVYAGHDDGVRGMNLALKGETSPILRSYVARLANQNH
HHHHHHHHHHHCCCCCCCHHHCCEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCC
FDIEPDLLGFLDELSDRMTRVVSAGTRFFRARIGVEARYADHSDFGWRRSIVRQPYRGTE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHCCCCCCC
LSAPPPPLASGGRLNRAGVSFLYLASDAATAAAEVRPHPGHYLSIGEFECLQNIRIASLD
CCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCEEECCHHHHHHCCEEEHHH
AGIMQYAGNEHELELFHFLYSADQLMATPVPPEKTARYSITQLIADCLRRKGFEGVSFRS
HHHHHHCCCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHH
SIGVGNNLCIFKPEWFAPVDGSEVVQRVKSLAYELAATPMILEPNQADHFRLDE
CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA