| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is yajO [H]
Identifier: 192290245
GI number: 192290245
Start: 1986198
End: 1987211
Strand: Reverse
Name: yajO [H]
Synonym: Rpal_1849
Alternate gene names: 192290245
Gene position: 1987211-1986198 (Counterclockwise)
Preceding gene: 192290246
Following gene: 192290244
Centisome position: 34.6
GC content: 67.55
Gene sequence:
>1014_bases ATGGACTATCGTTCGCTCGGCCGCAGCGGCCTGAAAGTCTCGCCGCTGTGCCTCGGCACCATGATGTTCGGCGGCGCGAC CGACGAGCCGACCTCGGCACGGATTATCGATAAGGCGCGCGACGCCGGGATCAATTTCATCGACACCGCCGACGTCTATT CAATGGGCGCATCCGAACAGGTGGTCGGCCGCGCGATCGCGGCGCATCGCGAGCACTGGATCCTCGCCACCAAGGTCGCC AACCCGATGGGCGACGGCCCGAACCATGCCGGGCTGTCGCGCCGCCGCGTGCTTCAGGCTGCCGACGACAGCCTGAAGCG CCTCGGCACCGACTGGATCGACATCCATTATCTGCACCGCGAGGACCACGCGACGCCGCTCGATGAAACGGTACGGGCGA TCGGCGACCTGATCCGCGCCGGCAAGATCCGGTACTTCGGCGTGTCGAACTATCGCGCCTGGCGCGTCGCCGAGATCTGC AACATCTGCGACCGCCTCGGCATCGACCGCCCGGTGGTCAGCCAGCCGTATTACAACGCCATGAACCGGATGCCGGAGGT CGAGCACATCCCGGCCTGCGGATTCTACGGCCTCGGTATCGTCCCCTACTCGCCGCTGGCACGCGGCGTCCTGACTGGCA AATACGCACCCGACACTGAGCCGGACAAGGACAGCCGCGCTGGCCGCGCCGACAAGCGGATGCTGCAGACCGAATGGCGG CCGGAATCGCTGAAGCTGGCGCAGCAGATCCGAGCCCACGCCGAGGCCAAGGGCGCCACCGCCGTCCAGTTTGCGGTCGG CTGGGTGCTGAACAACGCGCTGGTGACCTCGGTGATCGCCGGCCCACGCACCGAGCAGCAATGGGACGATTACGTTCGGG CGCTCGACTATCGCTTCACCGCTGACGACGAGGCGCTGGTCGACGCCCTGGTGGCGAGCGGCCATCCCTCCACGCCCGGC TACAACGACCCGGCCTACCCGATCGAGGGTCGCACGGTGCGCCACGCCGGCTGA
Upstream 100 bases:
>100_bases ACGTCTTCAAGCGCCCGCAAAGGCGTGGATGGCCGGGACAAGCCCGGCCATGACGGATGAGAACCGGGATCGATGCCACT ATCAAAAGACGAGGCCCCCC
Downstream 100 bases:
>100_bases CCGCCGGCGGCCGCCCCGGCCAAAGTTGCGGCCGATCAAGCCGATCCGCTGCGCCGCACCGTAGTGTCGCCGCATCACGC GGCCGCGCGATCGCTATTCC
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MDYRSLGRSGLKVSPLCLGTMMFGGATDEPTSARIIDKARDAGINFIDTADVYSMGASEQVVGRAIAAHREHWILATKVA NPMGDGPNHAGLSRRRVLQAADDSLKRLGTDWIDIHYLHREDHATPLDETVRAIGDLIRAGKIRYFGVSNYRAWRVAEIC NICDRLGIDRPVVSQPYYNAMNRMPEVEHIPACGFYGLGIVPYSPLARGVLTGKYAPDTEPDKDSRAGRADKRMLQTEWR PESLKLAQQIRAHAEAKGATAVQFAVGWVLNNALVTSVIAGPRTEQQWDDYVRALDYRFTADDEALVDALVASGHPSTPG YNDPAYPIEGRTVRHAG
Sequences:
>Translated_337_residues MDYRSLGRSGLKVSPLCLGTMMFGGATDEPTSARIIDKARDAGINFIDTADVYSMGASEQVVGRAIAAHREHWILATKVA NPMGDGPNHAGLSRRRVLQAADDSLKRLGTDWIDIHYLHREDHATPLDETVRAIGDLIRAGKIRYFGVSNYRAWRVAEIC NICDRLGIDRPVVSQPYYNAMNRMPEVEHIPACGFYGLGIVPYSPLARGVLTGKYAPDTEPDKDSRAGRADKRMLQTEWR PESLKLAQQIRAHAEAKGATAVQFAVGWVLNNALVTSVIAGPRTEQQWDDYVRALDYRFTADDEALVDALVASGHPSTPG YNDPAYPIEGRTVRHAG >Mature_337_residues MDYRSLGRSGLKVSPLCLGTMMFGGATDEPTSARIIDKARDAGINFIDTADVYSMGASEQVVGRAIAAHREHWILATKVA NPMGDGPNHAGLSRRRVLQAADDSLKRLGTDWIDIHYLHREDHATPLDETVRAIGDLIRAGKIRYFGVSNYRAWRVAEIC NICDRLGIDRPVVSQPYYNAMNRMPEVEHIPACGFYGLGIVPYSPLARGVLTGKYAPDTEPDKDSRAGRADKRMLQTEWR PESLKLAQQIRAHAEAKGATAVQFAVGWVLNNALVTSVIAGPRTEQQWDDYVRALDYRFTADDEALVDALVASGHPSTPG YNDPAYPIEGRTVRHAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=309, Percent_Identity=32.6860841423948, Blast_Score=155, Evalue=5e-38, Organism=Homo sapiens, GI27436964, Length=309, Percent_Identity=32.0388349514563, Blast_Score=154, Evalue=8e-38, Organism=Homo sapiens, GI27436962, Length=309, Percent_Identity=32.0388349514563, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI4504825, Length=307, Percent_Identity=32.5732899022801, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI27436966, Length=309, Percent_Identity=31.7152103559871, Blast_Score=151, Evalue=7e-37, Organism=Homo sapiens, GI27436971, Length=333, Percent_Identity=30.03003003003, Blast_Score=136, Evalue=2e-32, Organism=Homo sapiens, GI223718702, Length=226, Percent_Identity=38.9380530973451, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI41152114, Length=201, Percent_Identity=39.3034825870647, Blast_Score=125, Evalue=5e-29, Organism=Homo sapiens, GI41327764, Length=212, Percent_Identity=40.5660377358491, Blast_Score=118, Evalue=8e-27, Organism=Homo sapiens, GI223718708, Length=179, Percent_Identity=37.4301675977654, Blast_Score=95, Evalue=7e-20, Organism=Escherichia coli, GI87081735, Length=306, Percent_Identity=38.562091503268, Blast_Score=201, Evalue=5e-53, Organism=Escherichia coli, GI1789375, Length=329, Percent_Identity=33.434650455927, Blast_Score=163, Evalue=2e-41, Organism=Escherichia coli, GI1789199, Length=344, Percent_Identity=31.3953488372093, Blast_Score=133, Evalue=2e-32, Organism=Escherichia coli, GI1788070, Length=322, Percent_Identity=29.5031055900621, Blast_Score=118, Evalue=5e-28, Organism=Escherichia coli, GI1788081, Length=183, Percent_Identity=32.2404371584699, Blast_Score=87, Evalue=1e-18, Organism=Caenorhabditis elegans, GI212645785, Length=319, Percent_Identity=23.5109717868339, Blast_Score=77, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6325169, Length=325, Percent_Identity=29.5384615384615, Blast_Score=152, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6323998, Length=340, Percent_Identity=26.7647058823529, Blast_Score=113, Evalue=5e-26, Organism=Saccharomyces cerevisiae, GI6319951, Length=322, Percent_Identity=26.3975155279503, Blast_Score=103, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6319958, Length=313, Percent_Identity=24.6006389776358, Blast_Score=100, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6322615, Length=267, Percent_Identity=25.4681647940075, Blast_Score=87, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6321052, Length=156, Percent_Identity=31.4102564102564, Blast_Score=77, Evalue=4e-15, Organism=Drosophila melanogaster, GI24640980, Length=316, Percent_Identity=24.0506329113924, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI45549126, Length=316, Percent_Identity=24.0506329113924, Blast_Score=95, Evalue=7e-20, Organism=Drosophila melanogaster, GI24646155, Length=162, Percent_Identity=36.4197530864198, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24646159, Length=223, Percent_Identity=30.4932735426009, Blast_Score=90, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 37114; Mature: 37114
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYRSLGRSGLKVSPLCLGTMMFGGATDEPTSARIIDKARDAGINFIDTADVYSMGASEQ CCHHHHCCCCCEECHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEECHHHHHCCCHHH VVGRAIAAHREHWILATKVANPMGDGPNHAGLSRRRVLQAADDSLKRLGTDWIDIHYLHR HHHHHHHHHHHCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEC EDHATPLDETVRAIGDLIRAGKIRYFGVSNYRAWRVAEICNICDRLGIDRPVVSQPYYNA CCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHH MNRMPEVEHIPACGFYGLGIVPYSPLARGVLTGKYAPDTEPDKDSRAGRADKRMLQTEWR HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCC PESLKLAQQIRAHAEAKGATAVQFAVGWVLNNALVTSVIAGPRTEQQWDDYVRALDYRFT CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC ADDEALVDALVASGHPSTPGYNDPAYPIEGRTVRHAG CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCC >Mature Secondary Structure MDYRSLGRSGLKVSPLCLGTMMFGGATDEPTSARIIDKARDAGINFIDTADVYSMGASEQ CCHHHHCCCCCEECHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEECHHHHHCCCHHH VVGRAIAAHREHWILATKVANPMGDGPNHAGLSRRRVLQAADDSLKRLGTDWIDIHYLHR HHHHHHHHHHHCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEC EDHATPLDETVRAIGDLIRAGKIRYFGVSNYRAWRVAEICNICDRLGIDRPVVSQPYYNA CCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHH MNRMPEVEHIPACGFYGLGIVPYSPLARGVLTGKYAPDTEPDKDSRAGRADKRMLQTEWR HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCC PESLKLAQQIRAHAEAKGATAVQFAVGWVLNNALVTSVIAGPRTEQQWDDYVRALDYRFT CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC ADDEALVDALVASGHPSTPGYNDPAYPIEGRTVRHAG CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]