| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290232
Identifier: 192290232
GI number: 192290232
Start: 1973277
End: 1973504
Strand: Reverse
Name: 192290232
Synonym: Rpal_1836
Alternate gene names: NA
Gene position: 1973504-1973277 (Counterclockwise)
Preceding gene: 192290233
Following gene: 192290231
Centisome position: 34.36
GC content: 62.72
Gene sequence:
>228_bases ATGACCGACACTGCCGCCGAAGACGTCCGCAAAATCGCCACCGCCCTGTTGAAGACGGCCATCGAGATCGTCTCCGAAGA GGACGGCGGCGCGCACAACCAGTGCAAATTGTGCGGCGCATCGGTGCCCTGGCTGCAGACCGGCGACGAAATCAAGCACG CGGACGATTGCCCGGTGGTGATCGCAAAGCAGATCCTGTCCTCCCGGCCGAAGCTGCATGCAGTCTGA
Upstream 100 bases:
>100_bases AAGCCCCGCACCGGGCCACCGTTTAGTTGCAACGCTCGGCGAACGGCGGCACACTCCGGCCGCGGTCGCCCGGCCGCCAC GCGTTCCACGGAATCAAGCC
Downstream 100 bases:
>100_bases GTCCGGCAACAGCGGCGCCAACTCCGCCATGGCCAAGACCGCCGCCTCCGAGATCGCGGTATGTCTGGCGCCGGCGGAAT TCATCGACAGCGATCATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MTDTAAEDVRKIATALLKTAIEIVSEEDGGAHNQCKLCGASVPWLQTGDEIKHADDCPVVIAKQILSSRPKLHAV
Sequences:
>Translated_75_residues MTDTAAEDVRKIATALLKTAIEIVSEEDGGAHNQCKLCGASVPWLQTGDEIKHADDCPVVIAKQILSSRPKLHAV >Mature_74_residues TDTAAEDVRKIATALLKTAIEIVSEEDGGAHNQCKLCGASVPWLQTGDEIKHADDCPVVIAKQILSSRPKLHAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8009; Mature: 7878
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTAAEDVRKIATALLKTAIEIVSEEDGGAHNQCKLCGASVPWLQTGDEIKHADDCPVV CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHH IAKQILSSRPKLHAV HHHHHHCCCCCCCCC >Mature Secondary Structure TDTAAEDVRKIATALLKTAIEIVSEEDGGAHNQCKLCGASVPWLQTGDEIKHADDCPVV CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHH IAKQILSSRPKLHAV HHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA