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The map label for this gene is pbsA1 [H]

Identifier: 192290125

GI number: 192290125

Start: 1851075

End: 1851737

Strand: Reverse

Name: pbsA1 [H]

Synonym: Rpal_1727

Alternate gene names: 192290125

Gene position: 1851737-1851075 (Counterclockwise)

Preceding gene: 192290126

Following gene: 192290122

Centisome position: 32.24

GC content: 66.82

Gene sequence:

>663_bases
ATGGTGGTGGAAGCAGCGAAACGCGACGCCGAGAGCGTCGTCACCGCGTTGTATGTGCGGACCCGACAGCTGCATCTCGA
AGCCGAGAAGTCGGGCATCCTCTCCGAGATTCTGCACGGCACCGCAGGGCGCGACGGCTACACGCTGCTGCTGCGCAATC
TGCATCCGGCCTATCGGGCGATCGAAGCCGGCATCGAGCGACACCGCGACAATCCGATCCTGGCGCCGCTCGCCTCGCAT
CCGCTGGCACGCACGCCCGCGATCGAATCCGACCTCGCCGCGCTTGCCGGTGCGGATTGGCACGAGCGGCTGCCGGTACT
GCCGGCTGCCGAAGCCTATGCACAGCGGATCGCGGAGGTGAGCGAAGGCGACGGCAGCCGCCTGATCGCGCACGCCTACA
CCCGCTATCTCGGCGACCTCAACGGCGGACAAATCGTGCGTCGGCTGCTGGAGAAGACCATGCAGCTCAGTGCCGGCGAA
CTCGCCCACTACGACTTTTCGGCAATCGGTGATCCGGCGACGTTGAAGACCGACTATCGCGAGGCGCTGGAGCGGGCCGG
TGCTGCGGCTCCCGATGCGGCGGCGGTGATCGAGGAAGGCGCGGTGGCGTTCACCTGCAACATCGCACTGTCGGTCGCGG
TGCAGCAGCATCTCGAAGCCTAG

Upstream 100 bases:

>100_bases
CGCCCGCGCGCTGGTCCACGCCGCGCGGAACAAGAGCTGACGCGGGTTCGCATTCGCGAATCGATTTCTGCTATAAGGCC
TCCTGCATTGGAGGCTTGGT

Downstream 100 bases:

>100_bases
AGCGCTACATCGATTGATTGAAGCGGACTTGCCGCTCCCAAGGGCACTGAGTTTGCTTCCTGAGGGGCCCGGCAAAGCCG
GGCGTCTCGAAGGATGAGGA

Product: Heme oxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MVVEAAKRDAESVVTALYVRTRQLHLEAEKSGILSEILHGTAGRDGYTLLLRNLHPAYRAIEAGIERHRDNPILAPLASH
PLARTPAIESDLAALAGADWHERLPVLPAAEAYAQRIAEVSEGDGSRLIAHAYTRYLGDLNGGQIVRRLLEKTMQLSAGE
LAHYDFSAIGDPATLKTDYREALERAGAAAPDAAAVIEEGAVAFTCNIALSVAVQQHLEA

Sequences:

>Translated_220_residues
MVVEAAKRDAESVVTALYVRTRQLHLEAEKSGILSEILHGTAGRDGYTLLLRNLHPAYRAIEAGIERHRDNPILAPLASH
PLARTPAIESDLAALAGADWHERLPVLPAAEAYAQRIAEVSEGDGSRLIAHAYTRYLGDLNGGQIVRRLLEKTMQLSAGE
LAHYDFSAIGDPATLKTDYREALERAGAAAPDAAAVIEEGAVAFTCNIALSVAVQQHLEA
>Mature_220_residues
MVVEAAKRDAESVVTALYVRTRQLHLEAEKSGILSEILHGTAGRDGYTLLLRNLHPAYRAIEAGIERHRDNPILAPLASH
PLARTPAIESDLAALAGADWHERLPVLPAAEAYAQRIAEVSEGDGSRLIAHAYTRYLGDLNGGQIVRRLLEKTMQLSAGE
LAHYDFSAIGDPATLKTDYREALERAGAAAPDAAAVIEEGAVAFTCNIALSVAVQQHLEA

Specific function: Catalyzes the opening of the heme ring with the release of iron. Key enzyme in the synthesis of the chromophoric part of the photosynthetic antennas. Upon overexpression in E.coli with PCB:ferredoxin oxidoreductase, CpeS and either CpcB or PecB permits sy

COG id: COG5398

COG function: function code P; Heme oxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme oxygenase family [H]

Homologues:

Organism=Homo sapiens, GI4504437, Length=201, Percent_Identity=36.81592039801, Blast_Score=135, Evalue=3e-32,
Organism=Homo sapiens, GI187761311, Length=199, Percent_Identity=29.6482412060301, Blast_Score=108, Evalue=3e-24,
Organism=Homo sapiens, GI187761309, Length=199, Percent_Identity=29.6482412060301, Blast_Score=108, Evalue=3e-24,
Organism=Homo sapiens, GI187761307, Length=199, Percent_Identity=29.6482412060301, Blast_Score=108, Evalue=3e-24,
Organism=Homo sapiens, GI8051608, Length=199, Percent_Identity=29.6482412060301, Blast_Score=108, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002051
- InterPro:   IPR016053
- InterPro:   IPR016084
- InterPro:   IPR018207 [H]

Pfam domain/function: PF01126 Heme_oxygenase [H]

EC number: =1.14.99.3 [H]

Molecular weight: Translated: 23645; Mature: 23645

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: PS00593 HEME_OXYGENASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVEAAKRDAESVVTALYVRTRQLHLEAEKSGILSEILHGTAGRDGYTLLLRNLHPAYRA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHH
IEAGIERHRDNPILAPLASHPLARTPAIESDLAALAGADWHERLPVLPAAEAYAQRIAEV
HHHHHHHCCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHH
SEGDGSRLIAHAYTRYLGDLNGGQIVRRLLEKTMQLSAGELAHYDFSAIGDPATLKTDYR
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHCCCCHHHHHHHH
EALERAGAAAPDAAAVIEEGAVAFTCNIALSVAVQQHLEA
HHHHHCCCCCCHHHHHHHCCCEEEEHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVVEAAKRDAESVVTALYVRTRQLHLEAEKSGILSEILHGTAGRDGYTLLLRNLHPAYRA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHH
IEAGIERHRDNPILAPLASHPLARTPAIESDLAALAGADWHERLPVLPAAEAYAQRIAEV
HHHHHHHCCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHH
SEGDGSRLIAHAYTRYLGDLNGGQIVRRLLEKTMQLSAGELAHYDFSAIGDPATLKTDYR
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHCCCCHHHHHHHH
EALERAGAAAPDAAAVIEEGAVAFTCNIALSVAVQQHLEA
HHHHHCCCCCCHHHHHHHCCCEEEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]