| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290093
Identifier: 192290093
GI number: 192290093
Start: 1818522
End: 1819253
Strand: Reverse
Name: 192290093
Synonym: Rpal_1695
Alternate gene names: NA
Gene position: 1819253-1818522 (Counterclockwise)
Preceding gene: 192290094
Following gene: 192290089
Centisome position: 31.67
GC content: 66.12
Gene sequence:
>732_bases GTGTCCGTCCAGCGATTTCTGAAGCAGCGCGCCGTCAACGTCACCGTTGGTGGCAACTACTCGCTGGCGAACTGGTACGA CCAGAACGGCAAGCTGCGACAATTTGCCTGCCGCACCAGCCGGGTGTCGCCGTTCCGGATGATCGTCGACGTTCCGGTGA TCGGGCGCGTCGGCGACCACATCTCGTCCTACTTCAGCGAATTCGGTAAGCTGGACGGGCATATCAGCGACACCTTGCCC GGCGGCTTCCTGCTCGAACTGGCGGTGACCCGCGCGATGCGCGAGCGGCTGTCGAATCAGCTGAGCTGGCTCGAAAAGAA GATGCTCGATCCGGCCATCAAGGACGCGCGCGAGCAGGCGCGCGTGGTGCCGGTGTGCCCGCATTCCAGCCTGACGCTCG CCGACGGTTCCTCGCACACCTGCTTCGTGATCGACATGTCGATCTCTGGCGCCGCGGTGTCCGCAGATCTGCAGCCCGAG ATCGGAACGCCGCTCGCGGTCGGCAGCTGTGTCGGCCGCGTGGTGCGGCACCGGCCGGATGGATTTGCGGTGAAGTTCAC CGAACTGCAGAGCCGCAGTGAGTTGGAATGGCGAATCGCCCGCCCGCCGCAGCGGAATTCGACGGTCGGCGCACGGGTCG AGCGCCTCGCAACGATCGAGGCACCGCCACCACTAGCGCCGATCCAGCCCCTCGCCGCCGAAGACGACGGCGCGTTCGTG CTCGACGCCTGA
Upstream 100 bases:
>100_bases CAAGGTTGGAATCATTGGCGTGTAATGAGCAATCCAGAAGATCTCCGCGAGGGCGAGTGCGTTACTGATCGACAGGTATT TCCCCGGGGGCCAAACCGCC
Downstream 100 bases:
>100_bases CGCGCAACACTATCAGCAACACAAGGAAAGACAGGACGCCGCTCAGTCCTGCCGGGTCGCGGCCGTCACCGCCTGCGCCA GTACGGTAGCGTCGGCATGC
Product: type IV pilus assembly PilZ
Products: NA
Alternate protein names: Type IV Pilus Assembly Protein PilZ
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MSVQRFLKQRAVNVTVGGNYSLANWYDQNGKLRQFACRTSRVSPFRMIVDVPVIGRVGDHISSYFSEFGKLDGHISDTLP GGFLLELAVTRAMRERLSNQLSWLEKKMLDPAIKDAREQARVVPVCPHSSLTLADGSSHTCFVIDMSISGAAVSADLQPE IGTPLAVGSCVGRVVRHRPDGFAVKFTELQSRSELEWRIARPPQRNSTVGARVERLATIEAPPPLAPIQPLAAEDDGAFV LDA
Sequences:
>Translated_243_residues MSVQRFLKQRAVNVTVGGNYSLANWYDQNGKLRQFACRTSRVSPFRMIVDVPVIGRVGDHISSYFSEFGKLDGHISDTLP GGFLLELAVTRAMRERLSNQLSWLEKKMLDPAIKDAREQARVVPVCPHSSLTLADGSSHTCFVIDMSISGAAVSADLQPE IGTPLAVGSCVGRVVRHRPDGFAVKFTELQSRSELEWRIARPPQRNSTVGARVERLATIEAPPPLAPIQPLAAEDDGAFV LDA >Mature_242_residues SVQRFLKQRAVNVTVGGNYSLANWYDQNGKLRQFACRTSRVSPFRMIVDVPVIGRVGDHISSYFSEFGKLDGHISDTLPG GFLLELAVTRAMRERLSNQLSWLEKKMLDPAIKDAREQARVVPVCPHSSLTLADGSSHTCFVIDMSISGAAVSADLQPEI GTPLAVGSCVGRVVRHRPDGFAVKFTELQSRSELEWRIARPPQRNSTVGARVERLATIEAPPPLAPIQPLAAEDDGAFVL DA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26609; Mature: 26478
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVQRFLKQRAVNVTVGGNYSLANWYDQNGKLRQFACRTSRVSPFRMIVDVPVIGRVGDH CCHHHHHHHHCEEEEECCCEEECCEECCCCCEEHHHHHCCCCCCEEEEEECCCHHHHHHH ISSYFSEFGKLDGHISDTLPGGFLLELAVTRAMRERLSNQLSWLEKKMLDPAIKDAREQA HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC RVVPVCPHSSLTLADGSSHTCFVIDMSISGAAVSADLQPEIGTPLAVGSCVGRVVRHRPD CEEEECCCCCEEEECCCCCEEEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCC GFAVKFTELQSRSELEWRIARPPQRNSTVGARVERLATIEAPPPLAPIQPLAAEDDGAFV CCEEEEHHHCCCCCCEEEECCCCCCCCHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCEE LDA ECC >Mature Secondary Structure SVQRFLKQRAVNVTVGGNYSLANWYDQNGKLRQFACRTSRVSPFRMIVDVPVIGRVGDH CHHHHHHHHCEEEEECCCEEECCEECCCCCEEHHHHHCCCCCCEEEEEECCCHHHHHHH ISSYFSEFGKLDGHISDTLPGGFLLELAVTRAMRERLSNQLSWLEKKMLDPAIKDAREQA HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC RVVPVCPHSSLTLADGSSHTCFVIDMSISGAAVSADLQPEIGTPLAVGSCVGRVVRHRPD CEEEECCCCCEEEECCCCCEEEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCC GFAVKFTELQSRSELEWRIARPPQRNSTVGARVERLATIEAPPPLAPIQPLAAEDDGAFV CCEEEEHHHCCCCCCEEEECCCCCCCCHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCEE LDA ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA