The gene/protein map for NC_011004 is currently unavailable.
Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

Click here to switch to the map view.

The map label for this gene is 192290088

Identifier: 192290088

GI number: 192290088

Start: 1811534

End: 1813138

Strand: Reverse

Name: 192290088

Synonym: Rpal_1690

Alternate gene names: NA

Gene position: 1813138-1811534 (Counterclockwise)

Preceding gene: 192290089

Following gene: 192290087

Centisome position: 31.57

GC content: 66.23

Gene sequence:

>1605_bases
ATGGCCATGCGCCGCGGGCTGAAGCCGCTTCGGATCATCGTCGCCCTTGTCGCTATGATCGCGATCGCGGTGGCCCTCTG
GCAGCTGCAGGCCGGCAAAGACGGCTTGATCATTACCCACACCGAGGTCGGAGCCACGCCCGTCACGGTGTTCCGGCAGC
CGTCCGTCACCAGCGCTCCGGTGATGGTGATCGCGCACGGCTTCGCCGGCTCGCAGCAATTGATGCAGCCGTTCGCGCAG
ACGCTGGCGCGCAACGGCTACATCGCGGTGACCTTCGATTTCACCGGCCACGGCCGCAATCCGCTGACGATGCAGGGCGA
CGTCGACGAGCCGACCAAGATCACCGGCGTACTGGTCGACGAACTCGGCCGGGTCACCGACTACGCCCGCAAATTGCCGG
AGAGCGACGGCCGCGCCGCGGTGCTGGGCCATTCAATGGCCTCGGACATCGTGGTGGCCTACGCGGTGGAACATCCCGAG
ATCATCGCCACCGTCGCGGTCTCGGTGTTCACGCGGAAATCGACCGCGACGCTGCCGCACAATCTGCTGGTGATCGTCGG
CGCGCTCGAGCCGCAGATGCTGAAGGACGAGGGCCTGCGCATCGTCAATCAGGTCGCCGGCGGCAATGCCGTCGAGGGAC
GCACCTATGGCAGCTTCGCAAACGGCACCGCGCGCCGTTTCGTGCTCTCATCCGGCGTCGAGCACATCGGCGTGCTGTAC
AGCCAGGACTCGATGCGCGAGTCGCTGCATTGGATAAACGATGCGTTCGGCCGCACCAGCTCCGGCTGGATCGACCAGCG
GCCGCGCTGGCTGGCGCTCTTGTTCGGCGGCCTGATCGCGCTGGCCTGGCCGCTGTCGAAGCTGCTGCCGCGCGCGGCCG
CCACGCCGATGGGCGCCAGCCTGCCATGGAAGCAGCTTCTGGTGACAGCGATCGTGCCGGCGGTGCTGACGCCGCTGCTG
CTATGGAAGGCGCCGACCGACTTCCTGATCATCCTGCTTGGCGACTATCTGACGCTGCACTTCCTGCTGTACGGCCTGCT
TACGGCCACGATCCTGGTGCTGATCCGGCTGCGCAGCCGCCGTTCAGCGCCGCATCCCGCACGGCCGCACGCGCAGGAAC
TGGCCGCGCTCGGCGCCCTGCCCGATCCCGCCCACCCGCGCGTCGCGATCGGGGCACTGGCGATCGGCGCCGTGGCTGCG
ATCGCCTACAACATTCTCGGCTTCGGCATCGCACTCGACAGCTATCTGTTCTCGTTCATGCCTATCGAACAGCGCATCCA
CCTGATCGTAGCGGTCGCCTGCGGCACGATCCCGTATTTCGTCACTGCGGAATGGATGGCACACGGCCAGAACTCCAAGC
GCGGCGCCTACGCGCTGGCGAAGTTCTGCTTTCTGGCTTCGCTGGCGGCGGCGGTCGCGCTCAATCTACAGAAGCTGTTC
TTCCTGATCATCATCGTGCCGGCGATCCTGCTGCTGTTCCTGGCCTTCGGCCTGATCAGTAACTGGACCTACAAGGCGAC
CAATCACCCGCTGCCCGGTGCGCTGGCCAACGCGGTGCTGTTCGCCTGGGCAATTGCGGTGACGTTCCCGATGGTGATCC
GCTGA

Upstream 100 bases:

>100_bases
ATCCGAATCTCCTGACCGCTGGGTTTGTTCCGATTGCCGCACTGGTGATCTGGTGGACGATCCGCCGAATCCGCAAGAAA
CACATCCCGGACGTCGATTG

Downstream 100 bases:

>100_bases
TGCAGCACGAGCTGTGGCCGGCGAAAGGACAGCGGCGCTGGAGGGTGATCACCGACACCGTGATGGGCGGCGTGTCGCAG
GGTACCGTGCAGCTTGTCGA

Product: dienelactone hydrolase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 534; Mature: 533

Protein sequence:

>534_residues
MAMRRGLKPLRIIVALVAMIAIAVALWQLQAGKDGLIITHTEVGATPVTVFRQPSVTSAPVMVIAHGFAGSQQLMQPFAQ
TLARNGYIAVTFDFTGHGRNPLTMQGDVDEPTKITGVLVDELGRVTDYARKLPESDGRAAVLGHSMASDIVVAYAVEHPE
IIATVAVSVFTRKSTATLPHNLLVIVGALEPQMLKDEGLRIVNQVAGGNAVEGRTYGSFANGTARRFVLSSGVEHIGVLY
SQDSMRESLHWINDAFGRTSSGWIDQRPRWLALLFGGLIALAWPLSKLLPRAAATPMGASLPWKQLLVTAIVPAVLTPLL
LWKAPTDFLIILLGDYLTLHFLLYGLLTATILVLIRLRSRRSAPHPARPHAQELAALGALPDPAHPRVAIGALAIGAVAA
IAYNILGFGIALDSYLFSFMPIEQRIHLIVAVACGTIPYFVTAEWMAHGQNSKRGAYALAKFCFLASLAAAVALNLQKLF
FLIIIVPAILLLFLAFGLISNWTYKATNHPLPGALANAVLFAWAIAVTFPMVIR

Sequences:

>Translated_534_residues
MAMRRGLKPLRIIVALVAMIAIAVALWQLQAGKDGLIITHTEVGATPVTVFRQPSVTSAPVMVIAHGFAGSQQLMQPFAQ
TLARNGYIAVTFDFTGHGRNPLTMQGDVDEPTKITGVLVDELGRVTDYARKLPESDGRAAVLGHSMASDIVVAYAVEHPE
IIATVAVSVFTRKSTATLPHNLLVIVGALEPQMLKDEGLRIVNQVAGGNAVEGRTYGSFANGTARRFVLSSGVEHIGVLY
SQDSMRESLHWINDAFGRTSSGWIDQRPRWLALLFGGLIALAWPLSKLLPRAAATPMGASLPWKQLLVTAIVPAVLTPLL
LWKAPTDFLIILLGDYLTLHFLLYGLLTATILVLIRLRSRRSAPHPARPHAQELAALGALPDPAHPRVAIGALAIGAVAA
IAYNILGFGIALDSYLFSFMPIEQRIHLIVAVACGTIPYFVTAEWMAHGQNSKRGAYALAKFCFLASLAAAVALNLQKLF
FLIIIVPAILLLFLAFGLISNWTYKATNHPLPGALANAVLFAWAIAVTFPMVIR
>Mature_533_residues
AMRRGLKPLRIIVALVAMIAIAVALWQLQAGKDGLIITHTEVGATPVTVFRQPSVTSAPVMVIAHGFAGSQQLMQPFAQT
LARNGYIAVTFDFTGHGRNPLTMQGDVDEPTKITGVLVDELGRVTDYARKLPESDGRAAVLGHSMASDIVVAYAVEHPEI
IATVAVSVFTRKSTATLPHNLLVIVGALEPQMLKDEGLRIVNQVAGGNAVEGRTYGSFANGTARRFVLSSGVEHIGVLYS
QDSMRESLHWINDAFGRTSSGWIDQRPRWLALLFGGLIALAWPLSKLLPRAAATPMGASLPWKQLLVTAIVPAVLTPLLL
WKAPTDFLIILLGDYLTLHFLLYGLLTATILVLIRLRSRRSAPHPARPHAQELAALGALPDPAHPRVAIGALAIGAVAAI
AYNILGFGIALDSYLFSFMPIEQRIHLIVAVACGTIPYFVTAEWMAHGQNSKRGAYALAKFCFLASLAAAVALNLQKLFF
LIIIVPAILLLFLAFGLISNWTYKATNHPLPGALANAVLFAWAIAVTFPMVIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57520; Mature: 57388

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMRRGLKPLRIIVALVAMIAIAVALWQLQAGKDGLIITHTEVGATPVTVFRQPSVTSAP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEECCCCCCCC
VMVIAHGFAGSQQLMQPFAQTLARNGYIAVTFDFTGHGRNPLTMQGDVDEPTKITGVLVD
EEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCEECCCCCCCHHHHHHHHH
ELGRVTDYARKLPESDGRAAVLGHSMASDIVVAYAVEHPEIIATVAVSVFTRKSTATLPH
HHHHHHHHHHHCCCCCCCEEEECHHHHHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCCC
NLLVIVGALEPQMLKDEGLRIVNQVAGGNAVEGRTYGSFANGTARRFVLSSGVEHIGVLY
CEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHEEE
SQDSMRESLHWINDAFGRTSSGWIDQRPRWLALLFGGLIALAWPLSKLLPRAAATPMGAS
CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LPWKQLLVTAIVPAVLTPLLLWKAPTDFLIILLGDYLTLHFLLYGLLTATILVLIRLRSR
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSAPHPARPHAQELAALGALPDPAHPRVAIGALAIGAVAAIAYNILGFGIALDSYLFSFM
CCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PIEQRIHLIVAVACGTIPYFVTAEWMAHGQNSKRGAYALAKFCFLASLAAAVALNLQKLF
CHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLIIIVPAILLLFLAFGLISNWTYKATNHPLPGALANAVLFAWAIAVTFPMVIR
HHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AMRRGLKPLRIIVALVAMIAIAVALWQLQAGKDGLIITHTEVGATPVTVFRQPSVTSAP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEECCCCCCCC
VMVIAHGFAGSQQLMQPFAQTLARNGYIAVTFDFTGHGRNPLTMQGDVDEPTKITGVLVD
EEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCEECCCCCCCHHHHHHHHH
ELGRVTDYARKLPESDGRAAVLGHSMASDIVVAYAVEHPEIIATVAVSVFTRKSTATLPH
HHHHHHHHHHHCCCCCCCEEEECHHHHHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCCC
NLLVIVGALEPQMLKDEGLRIVNQVAGGNAVEGRTYGSFANGTARRFVLSSGVEHIGVLY
CEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHEEE
SQDSMRESLHWINDAFGRTSSGWIDQRPRWLALLFGGLIALAWPLSKLLPRAAATPMGAS
CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LPWKQLLVTAIVPAVLTPLLLWKAPTDFLIILLGDYLTLHFLLYGLLTATILVLIRLRSR
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSAPHPARPHAQELAALGALPDPAHPRVAIGALAIGAVAAIAYNILGFGIALDSYLFSFM
CCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PIEQRIHLIVAVACGTIPYFVTAEWMAHGQNSKRGAYALAKFCFLASLAAAVALNLQKLF
CHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLIIIVPAILLLFLAFGLISNWTYKATNHPLPGALANAVLFAWAIAVTFPMVIR
HHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA