| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is cusB [H]
Identifier: 192290003
GI number: 192290003
Start: 1717605
End: 1718999
Strand: Reverse
Name: cusB [H]
Synonym: Rpal_1604
Alternate gene names: 192290003
Gene position: 1718999-1717605 (Counterclockwise)
Preceding gene: 192290004
Following gene: 192290002
Centisome position: 29.93
GC content: 66.38
Gene sequence:
>1395_bases ATGACCAAGCTGCGCTCACCCTCACTGCTGTTTCTGATCGGACTCTGTCTCGCGTCGCCTGCCGCGGCTGACGAGCGATC GCCGCTGTACTACCGCGATCCATCCGGCGCGCCGCGCTGGTCGGCGGTGCCGAAGGCCGATGCGCAAGGCCGCGCTTATC TGCCGGTGTATGAGGCCGACGAGCCCTCTGCGCAGCCGGCGCCGAAGCCCGCGGCCGATCCCGCCCGCAAGATCCTGTAC TACCGCAATCCGATGGGGCTGCCCGACATCTCGAAGGTGCCGAAGAAGGACTCGATGGGGATGGACTACGTCCCCGTCTA TGAGGGCGAGGACAGTGCGGACGGCACGGTGAAGCTGTCGCCCGGCAAGATCCAGCGCAGCGGCGTCAAATCCGAGCCCG CCGAACGCCGCGCCCTGCATGTGATGGTGAAGGCGCCGGGCGTGATCCAGCTCGACGAGCGCCGCGTCTCGGTGATCGCG ATGCGCAGCGAAAGCTTCGTCGAGAAGATCGCCGACGTCACCACCGGCAGCGTCGTCAAAGCCGGGCAGCCGCTGATGCA GATCTACAGCTCGGCGATCGCCTCGGCCGCCGCCGAGTATCTGTCGACGATCACCTCGAAGAATAGCAGCACGATCGAAG CCTTCGGCCGCGGCTCGCGGCAGCGACTGGTCAATCTCGACGTACCCGACGAGACCATCGCCGAATTGGAGCGGACGCGG ACCGCGCCGGTGACGGTGCAATGGCGCGCGCCGCGCGACGGCATTGTGCTGGAGCGCAACGCGATCGACGGCATGCGCGC CAATGTCGGTGACGTGCTGTTCCGGATCGCCGACATCTCGACGGTGTGGGCCCTCGTCGACGTCGCCGAACGCGATCTCG GCACACTCTCGGTGGGTCAGAAGGTGACGATCCGAGCCCGAGCCTTCCCTGATCGCGCGCGCTCTGGAACGATCGCGGTG ATCTATCCGCAGGTCAATCGCGATACGCGCACTACGCGGCTACGCGTCGAACTCGCCAATCCGGATCTGAAGCTGTTGCC GGACATGTATGTCGATGCCGAGATCGACATCGCCGGCGATGCACCGGTGCTGACGATTCCAACCTCCGCCGTGCTCGACA ACGGCAGCCGGCGCATCGTGCTGGTGGACAAGGGCGACGGCCGGTTCGAGCCGCGGACGGTGACACTCGGACGCCGCGGC GACGGCGTCGTCGAGGTCAAACACGGCATCGACGAAGGCGAGGCGGTGGTCACCTCCGCCAACTTCCTGATCGACGCCGA GAGCAATCTGAAGGCCGCGCTAAAGGGCTTTGCCGACGGAGCGAACGCCCCCAGCAACGAGCCGCAAGCTTCGTCGCACA ATCACGCACACGACCACGCCGGAGCCCAGCCATGA
Upstream 100 bases:
>100_bases GGCGTTCAAATAGGCCAGCGCGGCGCCGCAGCCGCGGCGCCGCCGTCCTTCCTATCTCCCGAATTCGGATGCGCCCTCGC GGCGCGCGACGGTGCACGTC
Downstream 100 bases:
>100_bases TTGCCCGGATCATCGCCTGGTCGGCGCGCAATCTGCTGCTGGTGCTGTTCGGCACGGGTTTCGCCGTAGCCGCGGGTCTC TACGCCCTGCTGCATCTGCC
Product: RND family efflux transporter MFP subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MTKLRSPSLLFLIGLCLASPAAADERSPLYYRDPSGAPRWSAVPKADAQGRAYLPVYEADEPSAQPAPKPAADPARKILY YRNPMGLPDISKVPKKDSMGMDYVPVYEGEDSADGTVKLSPGKIQRSGVKSEPAERRALHVMVKAPGVIQLDERRVSVIA MRSESFVEKIADVTTGSVVKAGQPLMQIYSSAIASAAAEYLSTITSKNSSTIEAFGRGSRQRLVNLDVPDETIAELERTR TAPVTVQWRAPRDGIVLERNAIDGMRANVGDVLFRIADISTVWALVDVAERDLGTLSVGQKVTIRARAFPDRARSGTIAV IYPQVNRDTRTTRLRVELANPDLKLLPDMYVDAEIDIAGDAPVLTIPTSAVLDNGSRRIVLVDKGDGRFEPRTVTLGRRG DGVVEVKHGIDEGEAVVTSANFLIDAESNLKAALKGFADGANAPSNEPQASSHNHAHDHAGAQP
Sequences:
>Translated_464_residues MTKLRSPSLLFLIGLCLASPAAADERSPLYYRDPSGAPRWSAVPKADAQGRAYLPVYEADEPSAQPAPKPAADPARKILY YRNPMGLPDISKVPKKDSMGMDYVPVYEGEDSADGTVKLSPGKIQRSGVKSEPAERRALHVMVKAPGVIQLDERRVSVIA MRSESFVEKIADVTTGSVVKAGQPLMQIYSSAIASAAAEYLSTITSKNSSTIEAFGRGSRQRLVNLDVPDETIAELERTR TAPVTVQWRAPRDGIVLERNAIDGMRANVGDVLFRIADISTVWALVDVAERDLGTLSVGQKVTIRARAFPDRARSGTIAV IYPQVNRDTRTTRLRVELANPDLKLLPDMYVDAEIDIAGDAPVLTIPTSAVLDNGSRRIVLVDKGDGRFEPRTVTLGRRG DGVVEVKHGIDEGEAVVTSANFLIDAESNLKAALKGFADGANAPSNEPQASSHNHAHDHAGAQP >Mature_463_residues TKLRSPSLLFLIGLCLASPAAADERSPLYYRDPSGAPRWSAVPKADAQGRAYLPVYEADEPSAQPAPKPAADPARKILYY RNPMGLPDISKVPKKDSMGMDYVPVYEGEDSADGTVKLSPGKIQRSGVKSEPAERRALHVMVKAPGVIQLDERRVSVIAM RSESFVEKIADVTTGSVVKAGQPLMQIYSSAIASAAAEYLSTITSKNSSTIEAFGRGSRQRLVNLDVPDETIAELERTRT APVTVQWRAPRDGIVLERNAIDGMRANVGDVLFRIADISTVWALVDVAERDLGTLSVGQKVTIRARAFPDRARSGTIAVI YPQVNRDTRTTRLRVELANPDLKLLPDMYVDAEIDIAGDAPVLTIPTSAVLDNGSRRIVLVDKGDGRFEPRTVTLGRRGD GVVEVKHGIDEGEAVVTSANFLIDAESNLKAALKGFADGANAPSNEPQASSHNHAHDHAGAQP
Specific function: Part of a cation efflux system that mediates resistance to copper and silver [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI1786787, Length=396, Percent_Identity=29.2929292929293, Blast_Score=162, Evalue=4e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50003; Mature: 49872
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLRSPSLLFLIGLCLASPAAADERSPLYYRDPSGAPRWSAVPKADAQGRAYLPVYEAD CCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECC EPSAQPAPKPAADPARKILYYRNPMGLPDISKVPKKDSMGMDYVPVYEGEDSADGTVKLS CCCCCCCCCCCCCHHHEEEEEECCCCCCCHHHCCCCCCCCCCEEEEECCCCCCCCEEEEC PGKIQRSGVKSEPAERRALHVMVKAPGVIQLDERRVSVIAMRSESFVEKIADVTTGSVVK CCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCEEEEEEECCHHHHHHHHHCCCCCHHH AGQPLMQIYSSAIASAAAEYLSTITSKNSSTIEAFGRGSRQRLVNLDVPDETIAELERTR CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEECCCCHHHHHHHHHCC TAPVTVQWRAPRDGIVLERNAIDGMRANVGDVLFRIADISTVWALVDVAERDLGTLSVGQ CCCEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC KVTIRARAFPDRARSGTIAVIYPQVNRDTRTTRLRVELANPDLKLLPDMYVDAEIDIAGD EEEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCEECCCEEECEEEEECCC APVLTIPTSAVLDNGSRRIVLVDKGDGRFEPRTVTLGRRGDGVVEVKHGIDEGEAVVTSA CCEEEECCHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCCCEEEEECCCCCCCEEEEEE NFLIDAESNLKAALKGFADGANAPSNEPQASSHNHAHDHAGAQP EEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TKLRSPSLLFLIGLCLASPAAADERSPLYYRDPSGAPRWSAVPKADAQGRAYLPVYEAD CCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECC EPSAQPAPKPAADPARKILYYRNPMGLPDISKVPKKDSMGMDYVPVYEGEDSADGTVKLS CCCCCCCCCCCCCHHHEEEEEECCCCCCCHHHCCCCCCCCCCEEEEECCCCCCCCEEEEC PGKIQRSGVKSEPAERRALHVMVKAPGVIQLDERRVSVIAMRSESFVEKIADVTTGSVVK CCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCEEEEEEECCHHHHHHHHHCCCCCHHH AGQPLMQIYSSAIASAAAEYLSTITSKNSSTIEAFGRGSRQRLVNLDVPDETIAELERTR CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEECCCCHHHHHHHHHCC TAPVTVQWRAPRDGIVLERNAIDGMRANVGDVLFRIADISTVWALVDVAERDLGTLSVGQ CCCEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC KVTIRARAFPDRARSGTIAVIYPQVNRDTRTTRLRVELANPDLKLLPDMYVDAEIDIAGD EEEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCEECCCEEECEEEEECCC APVLTIPTSAVLDNGSRRIVLVDKGDGRFEPRTVTLGRRGDGVVEVKHGIDEGEAVVTSA CCEEEECCHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCCCEEEEECCCCCCCEEEEEE NFLIDAESNLKAALKGFADGANAPSNEPQASSHNHAHDHAGAQP EEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]