| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is tauC [H]
Identifier: 192289991
GI number: 192289991
Start: 1702903
End: 1703721
Strand: Reverse
Name: tauC [H]
Synonym: Rpal_1592
Alternate gene names: 192289991
Gene position: 1703721-1702903 (Counterclockwise)
Preceding gene: 192289992
Following gene: 192289990
Centisome position: 29.66
GC content: 64.84
Gene sequence:
>819_bases ATGCGATGGGTGAACATCAGGCCTGGACGGCAACTCGCCATCTACATGGCGGCGCTGCCGTTCGTGCTGGTGATCATTGC GTATCTGCTGGGCTCCGGCGCACGGCTGGCGGAGAATCCCAACGACAAGCTGCTGCCGGCGCTGTCCAGCATGGGCCAGG CGGTCAAGCAGATGGCCTTCCAGGTCGATGCCCGCACCGGCAGCTATCTGCTGTGGTCGGACACGCTGGCGAGCCTGGAA CGGCTGGGCGCGGCGCTGACGATCTCCACATCGCTGGCGCTCGTGTTCGGCATCGTGATCGGCCTGCTGCCGGCCGCGAA TGCCCTGCTCGGTTCGTTCGTGTCGGTCACCTCAATGGTGCCGCCGCTGGCACTGCTGCCGATCCTGTTCATCGTGATGG GGCTCGGCGAGAACTCCAAGATCGCCCTGATCGTGATCGGCACACTGCCCTGCATCATCCGCGACCTGTCGATGAAGGTG CTCGAACTGCCGCGCGAGCAACTGATCAAGGCGCAGACGCTCGGTGCCTCGACTTGGCAGATCGCGCTCCGCGTGGTGCT GCCGCAGATCCTGCCGCGACTGATCGACTCGCTGCGCCTGCAACTCGGACCGGCCTGGCTGTTCCTGATCGCCGCCGAAG CGATCGCCTCGGACTCGGGGCTCGGCTATCGCATCTTCCTGGTGCGGCGCTATTTGGCGATGGACGTGATCATCCCCTAC GTGGTGTGGATCACGCTGCTCGCCTTCTTGATGGACCTGGCGTTGCGACTGATCCAGCGCAAAGCCTTCCCCTGGTTCGC CGCGGTGAGGGCGGAATGA
Upstream 100 bases:
>100_bases CAAGGCCAACGTGAAGCTGCGGTTCGACCCGAGCTTCATGAACGCCGCCGCGGCCGGCAAGCTGTAAGCGATCACGTCAC AAGCAAGCCGGAGCACGACG
Downstream 100 bases:
>100_bases GCGCGATCCGTTTCGACAACGTCTGGAAAGAGTACGGCGACCACATCGTGCTGGAGCGGATCACGCTCGACGTCGCGCCG CGCGCGTTCGTCGCGCTGGT
Product: ABC transporter inner membrane protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MRWVNIRPGRQLAIYMAALPFVLVIIAYLLGSGARLAENPNDKLLPALSSMGQAVKQMAFQVDARTGSYLLWSDTLASLE RLGAALTISTSLALVFGIVIGLLPAANALLGSFVSVTSMVPPLALLPILFIVMGLGENSKIALIVIGTLPCIIRDLSMKV LELPREQLIKAQTLGASTWQIALRVVLPQILPRLIDSLRLQLGPAWLFLIAAEAIASDSGLGYRIFLVRRYLAMDVIIPY VVWITLLAFLMDLALRLIQRKAFPWFAAVRAE
Sequences:
>Translated_272_residues MRWVNIRPGRQLAIYMAALPFVLVIIAYLLGSGARLAENPNDKLLPALSSMGQAVKQMAFQVDARTGSYLLWSDTLASLE RLGAALTISTSLALVFGIVIGLLPAANALLGSFVSVTSMVPPLALLPILFIVMGLGENSKIALIVIGTLPCIIRDLSMKV LELPREQLIKAQTLGASTWQIALRVVLPQILPRLIDSLRLQLGPAWLFLIAAEAIASDSGLGYRIFLVRRYLAMDVIIPY VVWITLLAFLMDLALRLIQRKAFPWFAAVRAE >Mature_272_residues MRWVNIRPGRQLAIYMAALPFVLVIIAYLLGSGARLAENPNDKLLPALSSMGQAVKQMAFQVDARTGSYLLWSDTLASLE RLGAALTISTSLALVFGIVIGLLPAANALLGSFVSVTSMVPPLALLPILFIVMGLGENSKIALIVIGTLPCIIRDLSMKV LELPREQLIKAQTLGASTWQIALRVVLPQILPRLIDSLRLQLGPAWLFLIAAEAIASDSGLGYRIFLVRRYLAMDVIIPY VVWITLLAFLMDLALRLIQRKAFPWFAAVRAE
Specific function: Part of a binding-protein-dependent transport system for taurine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=200, Percent_Identity=36.5, Blast_Score=111, Evalue=4e-26, Organism=Escherichia coli, GI87081802, Length=162, Percent_Identity=32.0987654320988, Blast_Score=82, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29730; Mature: 29730
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWVNIRPGRQLAIYMAALPFVLVIIAYLLGSGARLAENPNDKLLPALSSMGQAVKQMAF CCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH QVDARTGSYLLWSDTLASLERLGAALTISTSLALVFGIVIGLLPAANALLGSFVSVTSMV HHCCCCCCEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PPLALLPILFIVMGLGENSKIALIVIGTLPCIIRDLSMKVLELPREQLIKAQTLGASTWQ CHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHH IALRVVLPQILPRLIDSLRLQLGPAWLFLIAAEAIASDSGLGYRIFLVRRYLAMDVIIPY HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH VVWITLLAFLMDLALRLIQRKAFPWFAAVRAE HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC >Mature Secondary Structure MRWVNIRPGRQLAIYMAALPFVLVIIAYLLGSGARLAENPNDKLLPALSSMGQAVKQMAF CCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH QVDARTGSYLLWSDTLASLERLGAALTISTSLALVFGIVIGLLPAANALLGSFVSVTSMV HHCCCCCCEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PPLALLPILFIVMGLGENSKIALIVIGTLPCIIRDLSMKVLELPREQLIKAQTLGASTWQ CHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHH IALRVVLPQILPRLIDSLRLQLGPAWLFLIAAEAIASDSGLGYRIFLVRRYLAMDVIIPY HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH VVWITLLAFLMDLALRLIQRKAFPWFAAVRAE HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503 [H]