| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is ycgI [H]
Identifier: 192289988
GI number: 192289988
Start: 1700599
End: 1701234
Strand: Reverse
Name: ycgI [H]
Synonym: Rpal_1589
Alternate gene names: 192289988
Gene position: 1701234-1700599 (Counterclockwise)
Preceding gene: 192289989
Following gene: 192289987
Centisome position: 29.62
GC content: 64.47
Gene sequence:
>636_bases ATGACCACGATTCCCGCTTCCGCCCGCATCGTGCTTGACACCGAGATCCCGGCGCGCGTGCCGTGGTCGGCGACCATCCG CAAGGGGCAGACGCTGCGCATCGTCGACAGCCACGGCCAGCAGGCGGTCGACACCCTGTTCTACGCCGCCAGTGATCATG GCGAACGCTACAGCGGCCAGGACACGCTGCGCGCGCAAGGCTCGGCCTACGTCACCACCGGCACCCGGATCATGTCGACC GAAGGCCGCACCATGCTGCGGATGGTGGCCGACAGCTGCGGGTTGCACGACACCTCTGCTGGCGCGTGCTCCTGTGAGAG CAACACCGTGCGGTTCGGGCATCAGACCAAGTATCTGCACGCCTGCCGCGAAAACTTCGTGCTGGAGGCCGCCAAGCACG GCCTGTCGAAGCGCGACATCGTGCCGAATCTGAACTTCTTCATGAACGTGCCACTCGATCCCGACGGCAATTTCACCGTG GTCGACGGCGTCTCCAAGCCCGGCGACTACGTCGAGATGGTCGCCGAGATGGACGTGCTGTGCCTGATCTCGAACTGTCC GCAGGTCAACAATCCCTGCAACGGCTTCTTCCCGACGCCGATCCAGGTGGTGATCTACGAGGCCAGCGAGGACTGA
Upstream 100 bases:
>100_bases CCGTTTCCGACGATCTGTGCCGCACCGTGTCGCTCGAAGCCAAGCGCGCGTTCGAGAACAACGCGTTCTATCTCGCCGGC GCTGCAGGGAGGGCTTGAGC
Downstream 100 bases:
>100_bases TCATGTTCAGCAAAGTTCTGATTGCCAACCGCGGCGAAATCGCTGGGCGGATCGGCCGCACCTTGCGCCGGATGGGGATC GCATCGGTCGCGATCTATTC
Product: urea carboxylase-associated protein 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MTTIPASARIVLDTEIPARVPWSATIRKGQTLRIVDSHGQQAVDTLFYAASDHGERYSGQDTLRAQGSAYVTTGTRIMST EGRTMLRMVADSCGLHDTSAGACSCESNTVRFGHQTKYLHACRENFVLEAAKHGLSKRDIVPNLNFFMNVPLDPDGNFTV VDGVSKPGDYVEMVAEMDVLCLISNCPQVNNPCNGFFPTPIQVVIYEASED
Sequences:
>Translated_211_residues MTTIPASARIVLDTEIPARVPWSATIRKGQTLRIVDSHGQQAVDTLFYAASDHGERYSGQDTLRAQGSAYVTTGTRIMST EGRTMLRMVADSCGLHDTSAGACSCESNTVRFGHQTKYLHACRENFVLEAAKHGLSKRDIVPNLNFFMNVPLDPDGNFTV VDGVSKPGDYVEMVAEMDVLCLISNCPQVNNPCNGFFPTPIQVVIYEASED >Mature_210_residues TTIPASARIVLDTEIPARVPWSATIRKGQTLRIVDSHGQQAVDTLFYAASDHGERYSGQDTLRAQGSAYVTTGTRIMSTE GRTMLRMVADSCGLHDTSAGACSCESNTVRFGHQTKYLHACRENFVLEAAKHGLSKRDIVPNLNFFMNVPLDPDGNFTVV DGVSKPGDYVEMVAEMDVLCLISNCPQVNNPCNGFFPTPIQVVIYEASED
Specific function: Unknown
COG id: COG3665
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018959 [H]
Pfam domain/function: PF09347 DUF1989 [H]
EC number: NA
Molecular weight: Translated: 23051; Mature: 22920
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIPASARIVLDTEIPARVPWSATIRKGQTLRIVDSHGQQAVDTLFYAASDHGERYSGQ CCCCCCCEEEEEECCCCCCCCCHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCC DTLRAQGSAYVTTGTRIMSTEGRTMLRMVADSCGLHDTSAGACSCESNTVRFGHQTKYLH CHHCCCCCEEEEECCEEEECCCHHHHHHHHHHCCCCCCCCCCEECCCCEEEECCCHHHHH ACRENFVLEAAKHGLSKRDIVPNLNFFMNVPLDPDGNFTVVDGVSKPGDYVEMVAEMDVL HHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHCCE CLISNCPQVNNPCNGFFPTPIQVVIYEASED EEECCCCCCCCCCCCCCCCCEEEEEEECCCC >Mature Secondary Structure TTIPASARIVLDTEIPARVPWSATIRKGQTLRIVDSHGQQAVDTLFYAASDHGERYSGQ CCCCCCEEEEEECCCCCCCCCHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCC DTLRAQGSAYVTTGTRIMSTEGRTMLRMVADSCGLHDTSAGACSCESNTVRFGHQTKYLH CHHCCCCCEEEEECCEEEECCCHHHHHHHHHHCCCCCCCCCCEECCCCEEEECCCHHHHH ACRENFVLEAAKHGLSKRDIVPNLNFFMNVPLDPDGNFTVVDGVSKPGDYVEMVAEMDVL HHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHCCE CLISNCPQVNNPCNGFFPTPIQVVIYEASED EEECCCCCCCCCCCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 10568751 [H]