| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289889
Identifier: 192289889
GI number: 192289889
Start: 1559231
End: 1559473
Strand: Reverse
Name: 192289889
Synonym: Rpal_1479
Alternate gene names: NA
Gene position: 1559473-1559231 (Counterclockwise)
Preceding gene: 192289893
Following gene: 192289887
Centisome position: 27.15
GC content: 62.14
Gene sequence:
>243_bases ATGGCTAATTGTGCCCATTGCAATGCGCAGATGACGTCGCTTGGCGTGGAAGCCATCGACGGGGTGTACGAGATCCATTC CTGGAAATGCGACGACTGCGGCCACGTGCTCGATATCGCCACCGCATCGGTCGAAGCCTACGACTTTCCGAGCTTCTGCC TCACCGAGCCGGGCGATCCCGATTGGCTGACCCTGCTGCCGCTCGCCGCCAATGCCCGGATCGAGCTGCACCTCACCGGC TAG
Upstream 100 bases:
>100_bases GGGGGAGTCGGGGGAGAACGATCAGCCAAGGCTTAAAGGGCTCACCCGCGTCGCTTCCGAAGTTCTGGAGCGTCGCGTTC GAACGATAAGGAGCCAGACC
Downstream 100 bases:
>100_bases ACGCCTTCAGGCCCTTTCAGCCGGAAAACGCTTCCGGCTGAAACCGCCCCGTTGCAATGCGCGGCAGCCGCGCCACGTCC CAATTGAAATAGTACACGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MANCAHCNAQMTSLGVEAIDGVYEIHSWKCDDCGHVLDIATASVEAYDFPSFCLTEPGDPDWLTLLPLAANARIELHLTG
Sequences:
>Translated_80_residues MANCAHCNAQMTSLGVEAIDGVYEIHSWKCDDCGHVLDIATASVEAYDFPSFCLTEPGDPDWLTLLPLAANARIELHLTG >Mature_79_residues ANCAHCNAQMTSLGVEAIDGVYEIHSWKCDDCGHVLDIATASVEAYDFPSFCLTEPGDPDWLTLLPLAANARIELHLTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8650; Mature: 8519
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 6.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANCAHCNAQMTSLGVEAIDGVYEIHSWKCDDCGHVLDIATASVEAYDFPSFCLTEPGDP CCCCCCCCCCHHHCCHHHHCCEEEECCCCCCCCCCEEEEEECEEEECCCCCEEECCCCCC DWLTLLPLAANARIELHLTG CEEEEEEECCCCEEEEEECC >Mature Secondary Structure ANCAHCNAQMTSLGVEAIDGVYEIHSWKCDDCGHVLDIATASVEAYDFPSFCLTEPGDP CCCCCCCCCHHHCCHHHHCCEEEECCCCCCCCCCEEEEEECEEEECCCCCEEECCCCCC DWLTLLPLAANARIELHLTG CEEEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA