| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289822
Identifier: 192289822
GI number: 192289822
Start: 1491353
End: 1491988
Strand: Reverse
Name: 192289822
Synonym: Rpal_1412
Alternate gene names: NA
Gene position: 1491988-1491353 (Counterclockwise)
Preceding gene: 192289824
Following gene: 192289820
Centisome position: 25.97
GC content: 69.18
Gene sequence:
>636_bases ATGGAGTATCTCTCCGCGCTCGGTCCACTGCTGATACTCATGTTGTTCGGTGGTGGCCTCGTGATCGCAGCGTATCTCAC CTTCGACGATATGCGTTCCCGTGGCGGTTCGTTCGATGCCACTTCTTTCATCACCTCGATTCGCTCGACGGTCGATCGCG TCCGCGCACTGCCGCCGACGACGCTGATCATGATCGGGGCGGTCGTGGTCGCGGCCCTGTTCGTCTATCTGGTGTCGGCG AGCGGCTACTATGCCCGCCCGGCCGCCGTGGAAACCAGCGCCGCCCCGGCGGCGGTCGAGACCGCCGCGACGCCGGCCCC CGAAGCCGCGGCGCCCGCTCCGGCGGCGAAGGCTGCTCCGGCACCCGCGCCTGCCACCAAGGCTCCGGCCGCCGACAAGC AGGCCGCTGCTGCGGCCCCGGCAGCGATCGCCGCGGTGCGTAACGTCACATCGACCAGTTGTGCCTCGGACGGCTGCCCG GTGACCTGCGCTGCCAACGAGACCCTGACCTCGGCCTATTGCGTCAATGGCGGCGCCGCCAAGCTCGCCGACCAGCTCAC GGTCAAGGACGGCTCGGTGACGGCGAAGTGCAGCCCGAGCGCCAGCGCCATCAAGGTCGCCTGCGCCCGCAAGTGA
Upstream 100 bases:
>100_bases CCGTTGCATATGCGTGTTCATTTGATTTTCGACAATGCAGCTTGCGGCAGGCGAAACCTATACACCTCGCGCCGGCCTGC CCTGAATGGAAAGACGTAAC
Downstream 100 bases:
>100_bases TCGAGAGGCGCGCCCGATCCGCATCGGGACAGCACCCCGCCAATCGAGCCCGGCTTCGCGCCGGGCTTTTTGTTGGGCGG AGCTAGAGCACTTCATCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MEYLSALGPLLILMLFGGGLVIAAYLTFDDMRSRGGSFDATSFITSIRSTVDRVRALPPTTLIMIGAVVVAALFVYLVSA SGYYARPAAVETSAAPAAVETAATPAPEAAAPAPAAKAAPAPAPATKAPAADKQAAAAAPAAIAAVRNVTSTSCASDGCP VTCAANETLTSAYCVNGGAAKLADQLTVKDGSVTAKCSPSASAIKVACARK
Sequences:
>Translated_211_residues MEYLSALGPLLILMLFGGGLVIAAYLTFDDMRSRGGSFDATSFITSIRSTVDRVRALPPTTLIMIGAVVVAALFVYLVSA SGYYARPAAVETSAAPAAVETAATPAPEAAAPAPAAKAAPAPAPATKAPAADKQAAAAAPAAIAAVRNVTSTSCASDGCP VTCAANETLTSAYCVNGGAAKLADQLTVKDGSVTAKCSPSASAIKVACARK >Mature_211_residues MEYLSALGPLLILMLFGGGLVIAAYLTFDDMRSRGGSFDATSFITSIRSTVDRVRALPPTTLIMIGAVVVAALFVYLVSA SGYYARPAAVETSAAPAAVETAATPAPEAAAPAPAAKAAPAPAPATKAPAADKQAAAAAPAAIAAVRNVTSTSCASDGCP VTCAANETLTSAYCVNGGAAKLADQLTVKDGSVTAKCSPSASAIKVACARK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20880; Mature: 20880
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYLSALGPLLILMLFGGGLVIAAYLTFDDMRSRGGSFDATSFITSIRSTVDRVRALPPT CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCH TLIMIGAVVVAALFVYLVSASGYYARPAAVETSAAPAAVETAATPAPEAAAPAPAAKAAP HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC APAPATKAPAADKQAAAAAPAAIAAVRNVTSTSCASDGCPVTCAANETLTSAYCVNGGAA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHCCCCCHH KLADQLTVKDGSVTAKCSPSASAIKVACARK HHHHHHEECCCCEEEECCCCCHHEEEEECCC >Mature Secondary Structure MEYLSALGPLLILMLFGGGLVIAAYLTFDDMRSRGGSFDATSFITSIRSTVDRVRALPPT CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCH TLIMIGAVVVAALFVYLVSASGYYARPAAVETSAAPAAVETAATPAPEAAAPAPAAKAAP HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC APAPATKAPAADKQAAAAAPAAIAAVRNVTSTSCASDGCPVTCAANETLTSAYCVNGGAA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHCCCCCHH KLADQLTVKDGSVTAKCSPSASAIKVACARK HHHHHHEECCCCEEEECCCCCHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA