| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is pgsA [H]
Identifier: 192289771
GI number: 192289771
Start: 1433125
End: 1433751
Strand: Reverse
Name: pgsA [H]
Synonym: Rpal_1361
Alternate gene names: 192289771
Gene position: 1433751-1433125 (Counterclockwise)
Preceding gene: 192289772
Following gene: 192289770
Centisome position: 24.96
GC content: 64.59
Gene sequence:
>627_bases ATGAACAACGTCTCGACGAGAGCGCCGGTGCGGGGAACGAAGACGTCACTGACGCTTCCGAACATCCTCACCTATGCCCG CATCGCGGCGATCCCGGTGGTGGTCGGCTGCATCTTCGCTCAGTCCATCCTCGGTGGACCGCTGGCGCTGCGCTGGGTGG CCCTGGCGGTGTTCATCGCCGCGGCGATCACCGATTTCCTCGACGGCCATTTCGCCCGGATCTGGGATCAGCAGTCGGCA TTCGGCCGGATGCTCGATCCGATCGCCGACAAGCTGCTGGTAGCATCCTGCCTGCTGATGCTGGCGGCCGACAGCATCAT TCATGGCTGGACGCTGTGGGCAGCGATCGTGATCCTGTGCCGCGAGATCCTGGTGTCGGGCCTGCGCGAATATCTCGCCG CGCTGCGCGTCAGCGTGCCGGTGACGCGGCTCGCGAAATGGAAGACCACCGCGCAGCTGGTCGCGATCGGCTTCCTGCTC GCAGGTGAAGCCGGCGACGAGGTGCTGCCCTTCACCACCGAGATCGGCGTATCGCTGCTGTGGCTGTCGGCGCTGCTGAC GATGTACACCGGCTACGACTATTTCCGCGCCGGCATTCACCACCTGATCGAAGAGGATCAGGCATGA
Upstream 100 bases:
>100_bases GCGGCCGCGCCCAATGCGGATTTCACCTTTTCCTGATACGGAACGAGAGCACCCGGGTCGGAGGTTGACCTTCCGTCGCG GGCAGTATTGGTAAGTCACG
Downstream 100 bases:
>100_bases AGGTGAAGTATTTCGCCTGGGTGCGCGAGCGGATCGGCGTCGACGAAGAGACGGTCGAACCGCCGCCGGCGGTGACAACC GTCGCCGACCTGATTGGCTG
Product: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MNNVSTRAPVRGTKTSLTLPNILTYARIAAIPVVVGCIFAQSILGGPLALRWVALAVFIAAAITDFLDGHFARIWDQQSA FGRMLDPIADKLLVASCLLMLAADSIIHGWTLWAAIVILCREILVSGLREYLAALRVSVPVTRLAKWKTTAQLVAIGFLL AGEAGDEVLPFTTEIGVSLLWLSALLTMYTGYDYFRAGIHHLIEEDQA
Sequences:
>Translated_208_residues MNNVSTRAPVRGTKTSLTLPNILTYARIAAIPVVVGCIFAQSILGGPLALRWVALAVFIAAAITDFLDGHFARIWDQQSA FGRMLDPIADKLLVASCLLMLAADSIIHGWTLWAAIVILCREILVSGLREYLAALRVSVPVTRLAKWKTTAQLVAIGFLL AGEAGDEVLPFTTEIGVSLLWLSALLTMYTGYDYFRAGIHHLIEEDQA >Mature_208_residues MNNVSTRAPVRGTKTSLTLPNILTYARIAAIPVVVGCIFAQSILGGPLALRWVALAVFIAAAITDFLDGHFARIWDQQSA FGRMLDPIADKLLVASCLLMLAADSIIHGWTLWAAIVILCREILVSGLREYLAALRVSVPVTRLAKWKTTAQLVAIGFLL AGEAGDEVLPFTTEIGVSLLWLSALLTMYTGYDYFRAGIHHLIEEDQA
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=194, Percent_Identity=36.5979381443299, Blast_Score=100, Evalue=7e-23, Organism=Saccharomyces cerevisiae, GI6320059, Length=178, Percent_Identity=29.7752808988764, Blast_Score=66, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 22622; Mature: 22622
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNVSTRAPVRGTKTSLTLPNILTYARIAAIPVVVGCIFAQSILGGPLALRWVALAVFIA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH AAITDFLDGHFARIWDQQSAFGRMLDPIADKLLVASCLLMLAADSIIHGWTLWAAIVILC HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REILVSGLREYLAALRVSVPVTRLAKWKTTAQLVAIGFLLAGEAGDEVLPFTTEIGVSLL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH WLSALLTMYTGYDYFRAGIHHLIEEDQA HHHHHHHHHCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNNVSTRAPVRGTKTSLTLPNILTYARIAAIPVVVGCIFAQSILGGPLALRWVALAVFIA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH AAITDFLDGHFARIWDQQSAFGRMLDPIADKLLVASCLLMLAADSIIHGWTLWAAIVILC HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REILVSGLREYLAALRVSVPVTRLAKWKTTAQLVAIGFLLAGEAGDEVLPFTTEIGVSLL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH WLSALLTMYTGYDYFRAGIHHLIEEDQA HHHHHHHHHCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA