| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289541
Identifier: 192289541
GI number: 192289541
Start: 1201130
End: 1201933
Strand: Reverse
Name: 192289541
Synonym: Rpal_1128
Alternate gene names: NA
Gene position: 1201933-1201130 (Counterclockwise)
Preceding gene: 192289542
Following gene: 192289531
Centisome position: 20.92
GC content: 66.42
Gene sequence:
>804_bases TTGCCTGAAACCGAAAGCCTCACGTTCGCGGCACTCGACGGCATCGCCTTCGCGGCCGCGCGGGGTCGGCTCGGCGCTTT GCCGGAGTATGTCGCCGGCGACCTCGGCCCCCTGGTCGAGATGATCCAACTCTCCCGCACCGGCCTCCTGCCGTCGCCAT CCTCGGCGCCGTGGCTGCGTCTGAACGGAACGGAAGCGCTGCTGCACGCGGCCGTTGGCTCTGAGAGATGGGCATCTCCG CACGGCAGCGGCTCCGGTTTCCTCCGATGCGACGTGCTGCAGACCGAACCGACGCGATGGACCACTTTCAAACTCGAAGC TCACAAGGCCGCGCTCGCTGCGGGATTTCCCTCGCAGGCGGTCGCCCGTCTGATGGGCGCCATGGGAGAGATCGCGGACA ACGTCCTGGAGCACTCAGAGTCTCCGGCGACGGGCTTCGTCATGTTCGCCGGCCGCTCTGGATCCTTCGAGTTCGTCATC GCCGACGACGGAATCGGAGCACTCGCCAGCCTTCGGTCGAACTCGGAGTACGCCCACCTGATCGACGAGGGCGATGCGCT GCAGTGCGCGCTGACCGACGGCGAATCGCGGTTCGGCAAGGCGGCGCAGCGGGGTACCGGATTCAGCACGCTCTTCAGAA GCCTGGTGAACATGACGGCTTCGCTGCGCTTCCGGTCGGGTGACCACGCCCTCGATATGCGGGGCAGATCGCCGACGCTG GTGAATGCTCACGTCGCCAGAAAGCCGCGGGCGGCTGGATTCATGGTGGGGGTGCACTGCGAGGCGCCAAAAGGATCGCA ATAG
Upstream 100 bases:
>100_bases CAGCTGCTGGACGACCTGTTCGAAACCAACTGGGAGATCTCGCGCGACGCCATCGCTAAGGTGATGCGCGGGGATCCGCC TCCGGCGCCGGCGGTCGCAG
Downstream 100 bases:
>100_bases GGCGCGCGGATCTAGAGTTGATTCCAGTTTGCGAGCAGCTTCCCGGCAAAATCCTCGTCTCGTACGATTCCGTTCTTGTG CAGGTTCTTCTTGGCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MPETESLTFAALDGIAFAAARGRLGALPEYVAGDLGPLVEMIQLSRTGLLPSPSSAPWLRLNGTEALLHAAVGSERWASP HGSGSGFLRCDVLQTEPTRWTTFKLEAHKAALAAGFPSQAVARLMGAMGEIADNVLEHSESPATGFVMFAGRSGSFEFVI ADDGIGALASLRSNSEYAHLIDEGDALQCALTDGESRFGKAAQRGTGFSTLFRSLVNMTASLRFRSGDHALDMRGRSPTL VNAHVARKPRAAGFMVGVHCEAPKGSQ
Sequences:
>Translated_267_residues MPETESLTFAALDGIAFAAARGRLGALPEYVAGDLGPLVEMIQLSRTGLLPSPSSAPWLRLNGTEALLHAAVGSERWASP HGSGSGFLRCDVLQTEPTRWTTFKLEAHKAALAAGFPSQAVARLMGAMGEIADNVLEHSESPATGFVMFAGRSGSFEFVI ADDGIGALASLRSNSEYAHLIDEGDALQCALTDGESRFGKAAQRGTGFSTLFRSLVNMTASLRFRSGDHALDMRGRSPTL VNAHVARKPRAAGFMVGVHCEAPKGSQ >Mature_266_residues PETESLTFAALDGIAFAAARGRLGALPEYVAGDLGPLVEMIQLSRTGLLPSPSSAPWLRLNGTEALLHAAVGSERWASPH GSGSGFLRCDVLQTEPTRWTTFKLEAHKAALAAGFPSQAVARLMGAMGEIADNVLEHSESPATGFVMFAGRSGSFEFVIA DDGIGALASLRSNSEYAHLIDEGDALQCALTDGESRFGKAAQRGTGFSTLFRSLVNMTASLRFRSGDHALDMRGRSPTLV NAHVARKPRAAGFMVGVHCEAPKGSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28143; Mature: 28012
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPETESLTFAALDGIAFAAARGRLGALPEYVAGDLGPLVEMIQLSRTGLLPSPSSAPWLR CCCCCCEEEEHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCEEE LNGTEALLHAAVGSERWASPHGSGSGFLRCDVLQTEPTRWTTFKLEAHKAALAAGFPSQA ECCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEHHHHHHHCCCCHHH VARLMGAMGEIADNVLEHSESPATGFVMFAGRSGSFEFVIADDGIGALASLRSNSEYAHL HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHCCCCEEEE IDEGDALQCALTDGESRFGKAAQRGTGFSTLFRSLVNMTASLRFRSGDHALDMRGRSPTL ECCCCEEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHEEEECCCCCEEECCCCCCCE VNAHVARKPRAAGFMVGVHCEAPKGSQ EEHHHHCCCCCCCEEEEEEECCCCCCC >Mature Secondary Structure PETESLTFAALDGIAFAAARGRLGALPEYVAGDLGPLVEMIQLSRTGLLPSPSSAPWLR CCCCCEEEEHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCEEE LNGTEALLHAAVGSERWASPHGSGSGFLRCDVLQTEPTRWTTFKLEAHKAALAAGFPSQA ECCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEHHHHHHHCCCCHHH VARLMGAMGEIADNVLEHSESPATGFVMFAGRSGSFEFVIADDGIGALASLRSNSEYAHL HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHCCCCEEEE IDEGDALQCALTDGESRFGKAAQRGTGFSTLFRSLVNMTASLRFRSGDHALDMRGRSPTL ECCCCEEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHEEEECCCCCEEECCCCCCCE VNAHVARKPRAAGFMVGVHCEAPKGSQ EEHHHHCCCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA