The gene/protein map for NC_011004 is currently unavailable.
Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

Click here to switch to the map view.

The map label for this gene is 192289531

Identifier: 192289531

GI number: 192289531

Start: 1185251

End: 1185577

Strand: Reverse

Name: 192289531

Synonym: Rpal_1118

Alternate gene names: NA

Gene position: 1185577-1185251 (Counterclockwise)

Preceding gene: 192289541

Following gene: 192289530

Centisome position: 20.64

GC content: 72.78

Gene sequence:

>327_bases
ATGAGTGGCGTGAACGTGCTGCAGCGTGACGACCGGCGGGACCAGCTGACGTCAGTCCTGCCGGCTTTCTTTGCCGGGCC
CGGCCGGCCGGACTGCCCGATCGAATGCGGTCCGGGCTGGGCCATGGTCCTCGACCGGCTCTGCGTCCGGATCGCCGCGA
CGCTCGCGGACCGCGAAAGCTTCCGCTTCGAGCGCATCCGGAGCTTCCGGGGCGCCCTGCTCGTCGGCGAGCGAGGCGGC
GGTCCGCGCCGCGATCGATCTCGCCGAGGCGCGCAGCATGTGCGTCTGCGAACTCTGCGGCGCCCGCGGCCGGCGCTATC
GGGCTGA

Upstream 100 bases:

>100_bases
TGCCTAATGAGCATATTTACTCTGATTAATGCCCGATCCATTTTCGCAAATAAGAATAAAACAAGAACATTGATTGTCCT
GTTGCGTGAGTGAGGTCGGT

Downstream 100 bases:

>100_bases
GGACACCGTCGCGACCCGCTGCCGGGACCACGCCGAGGGCGCGCCGGCATTCAGCGCGGCGATGGAGAACGTCCATCTGA
TCCAGGTGACGGTGAAGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MSGVNVLQRDDRRDQLTSVLPAFFAGPGRPDCPIECGPGWAMVLDRLCVRIAATLADRESFRFERIRSFRGALLVGERGG
GPRRDRSRRGAQHVRLRTLRRPRPALSG

Sequences:

>Translated_108_residues
MSGVNVLQRDDRRDQLTSVLPAFFAGPGRPDCPIECGPGWAMVLDRLCVRIAATLADRESFRFERIRSFRGALLVGERGG
GPRRDRSRRGAQHVRLRTLRRPRPALSG
>Mature_107_residues
SGVNVLQRDDRRDQLTSVLPAFFAGPGRPDCPIECGPGWAMVLDRLCVRIAATLADRESFRFERIRSFRGALLVGERGGG
PRRDRSRRGAQHVRLRTLRRPRPALSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12111; Mature: 11980

Theoretical pI: Translated: 12.17; Mature: 12.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGVNVLQRDDRRDQLTSVLPAFFAGPGRPDCPIECGPGWAMVLDRLCVRIAATLADRES
CCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHH
FRFERIRSFRGALLVGERGGGPRRDRSRRGAQHVRLRTLRRPRPALSG
HHHHHHHHHHCEEEEECCCCCCCCHHHHCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SGVNVLQRDDRRDQLTSVLPAFFAGPGRPDCPIECGPGWAMVLDRLCVRIAATLADRES
CCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHH
FRFERIRSFRGALLVGERGGGPRRDRSRRGAQHVRLRTLRRPRPALSG
HHHHHHHHHHCEEEEECCCCCCCCHHHHCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA