| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289531
Identifier: 192289531
GI number: 192289531
Start: 1185251
End: 1185577
Strand: Reverse
Name: 192289531
Synonym: Rpal_1118
Alternate gene names: NA
Gene position: 1185577-1185251 (Counterclockwise)
Preceding gene: 192289541
Following gene: 192289530
Centisome position: 20.64
GC content: 72.78
Gene sequence:
>327_bases ATGAGTGGCGTGAACGTGCTGCAGCGTGACGACCGGCGGGACCAGCTGACGTCAGTCCTGCCGGCTTTCTTTGCCGGGCC CGGCCGGCCGGACTGCCCGATCGAATGCGGTCCGGGCTGGGCCATGGTCCTCGACCGGCTCTGCGTCCGGATCGCCGCGA CGCTCGCGGACCGCGAAAGCTTCCGCTTCGAGCGCATCCGGAGCTTCCGGGGCGCCCTGCTCGTCGGCGAGCGAGGCGGC GGTCCGCGCCGCGATCGATCTCGCCGAGGCGCGCAGCATGTGCGTCTGCGAACTCTGCGGCGCCCGCGGCCGGCGCTATC GGGCTGA
Upstream 100 bases:
>100_bases TGCCTAATGAGCATATTTACTCTGATTAATGCCCGATCCATTTTCGCAAATAAGAATAAAACAAGAACATTGATTGTCCT GTTGCGTGAGTGAGGTCGGT
Downstream 100 bases:
>100_bases GGACACCGTCGCGACCCGCTGCCGGGACCACGCCGAGGGCGCGCCGGCATTCAGCGCGGCGATGGAGAACGTCCATCTGA TCCAGGTGACGGTGAAGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MSGVNVLQRDDRRDQLTSVLPAFFAGPGRPDCPIECGPGWAMVLDRLCVRIAATLADRESFRFERIRSFRGALLVGERGG GPRRDRSRRGAQHVRLRTLRRPRPALSG
Sequences:
>Translated_108_residues MSGVNVLQRDDRRDQLTSVLPAFFAGPGRPDCPIECGPGWAMVLDRLCVRIAATLADRESFRFERIRSFRGALLVGERGG GPRRDRSRRGAQHVRLRTLRRPRPALSG >Mature_107_residues SGVNVLQRDDRRDQLTSVLPAFFAGPGRPDCPIECGPGWAMVLDRLCVRIAATLADRESFRFERIRSFRGALLVGERGGG PRRDRSRRGAQHVRLRTLRRPRPALSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12111; Mature: 11980
Theoretical pI: Translated: 12.17; Mature: 12.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGVNVLQRDDRRDQLTSVLPAFFAGPGRPDCPIECGPGWAMVLDRLCVRIAATLADRES CCCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHH FRFERIRSFRGALLVGERGGGPRRDRSRRGAQHVRLRTLRRPRPALSG HHHHHHHHHHCEEEEECCCCCCCCHHHHCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SGVNVLQRDDRRDQLTSVLPAFFAGPGRPDCPIECGPGWAMVLDRLCVRIAATLADRES CCCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHH FRFERIRSFRGALLVGERGGGPRRDRSRRGAQHVRLRTLRRPRPALSG HHHHHHHHHHCEEEEECCCCCCCCHHHHCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA