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The map label for this gene is yhhW [C]

Identifier: 192289407

GI number: 192289407

Start: 1044447

End: 1045145

Strand: Reverse

Name: yhhW [C]

Synonym: Rpal_0980

Alternate gene names: 192289407

Gene position: 1045145-1044447 (Counterclockwise)

Preceding gene: 192289409

Following gene: 192289406

Centisome position: 18.2

GC content: 67.95

Gene sequence:

>699_bases
ATGATTGAACTCCGTCCCTTCGACCGGCTCGGCGGCGCCGACCATGGCTGGCTCAAGGCCAAGCATCACTTCTCGTTCGC
CAGCTACTACGACCCCAACAACATGGGTCACGGCGCCCTAAGGGTCTGGAACGACGACGAGATCGCCCCGGATACCGGCT
TCCCGCCGCATCCGCATCGCGACATGGAGATCATCACCTATGTGCGCGACGGCGCAATCACCCACCAGGACTCACTGGGC
AACAAGGGCCGCACCCAAGCCGGCGACGTCCAAGTGATGAGCGCGGGTTCGGGCGTCCGGCACTCCGAGTACAACCTCGA
GCCGGAGACCACCCGGATCTTCCAGATCTGGATCGAGCCGACGCAAGGCGGCGGCCAGCCGACCTGGGGCTCCAAGCCGT
TCCCGAAGGCTGACCGCTCCGGCAAGCTCGTCACCATCGCGTCGGGCTTTGCGTCCGACACCGACGCACTGCCGATCCGC
GCCGACGCCCGGGTGCTGGCGACGACGCTGAAGGCCGGCGAGACCGCCACCTACGACGCTGAGAAGGCGCGGCACCTGTA
TCTGGTCCCGGCCGTCGGCAGCGTCGAAGTCAACGGCGTCCGCGTCAGCGCGCGCGACGGCGCCGCGATCCACGGCGAGA
CCCAGCTCACCATCACGGCGCTCGCAGACGCCGAGCTGGTGCTGGTCGACGCGGCGTGA

Upstream 100 bases:

>100_bases
AGTTTCGATCATTTCTATTTATGAAACGATTGGTGGCCCTTATTCAAGAGCCAACGCAAGTCACTGGCGCCAACCCGGCG
CCCGACATGAGGAGGCTTCA

Downstream 100 bases:

>100_bases
GGCATTAGCGCGCCAATCACCACCGTCATGGCCGGGCTCGACCCGGCCATCCATCCTCTTCACCTGAACTCTTGCGAAGA
CGGATGGATGCGCGGGTCAA

Product: pirin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MIELRPFDRLGGADHGWLKAKHHFSFASYYDPNNMGHGALRVWNDDEIAPDTGFPPHPHRDMEIITYVRDGAITHQDSLG
NKGRTQAGDVQVMSAGSGVRHSEYNLEPETTRIFQIWIEPTQGGGQPTWGSKPFPKADRSGKLVTIASGFASDTDALPIR
ADARVLATTLKAGETATYDAEKARHLYLVPAVGSVEVNGVRVSARDGAAIHGETQLTITALADAELVLVDAA

Sequences:

>Translated_232_residues
MIELRPFDRLGGADHGWLKAKHHFSFASYYDPNNMGHGALRVWNDDEIAPDTGFPPHPHRDMEIITYVRDGAITHQDSLG
NKGRTQAGDVQVMSAGSGVRHSEYNLEPETTRIFQIWIEPTQGGGQPTWGSKPFPKADRSGKLVTIASGFASDTDALPIR
ADARVLATTLKAGETATYDAEKARHLYLVPAVGSVEVNGVRVSARDGAAIHGETQLTITALADAELVLVDAA
>Mature_232_residues
MIELRPFDRLGGADHGWLKAKHHFSFASYYDPNNMGHGALRVWNDDEIAPDTGFPPHPHRDMEIITYVRDGAITHQDSLG
NKGRTQAGDVQVMSAGSGVRHSEYNLEPETTRIFQIWIEPTQGGGQPTWGSKPFPKADRSGKLVTIASGFASDTDALPIR
ADARVLATTLKAGETATYDAEKARHLYLVPAVGSVEVNGVRVSARDGAAIHGETQLTITALADAELVLVDAA

Specific function: Unknown

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Homo sapiens, GI66363697, Length=124, Percent_Identity=31.4516129032258, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI4505823, Length=124, Percent_Identity=31.4516129032258, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1789847, Length=231, Percent_Identity=42.8571428571429, Blast_Score=183, Evalue=9e-48,
Organism=Escherichia coli, GI1789493, Length=237, Percent_Identity=29.957805907173, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin [H]

EC number: NA

Molecular weight: Translated: 25067; Mature: 25067

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIELRPFDRLGGADHGWLKAKHHFSFASYYDPNNMGHGALRVWNDDEIAPDTGFPPHPHR
CCCCCCCHHCCCCCCCEEEEEECCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
DMEIITYVRDGAITHQDSLGNKGRTQAGDVQVMSAGSGVRHSEYNLEPETTRIFQIWIEP
CCEEEEEEECCCEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEEE
TQGGGQPTWGSKPFPKADRSGKLVTIASGFASDTDALPIRADARVLATTLKAGETATYDA
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCEEEEEECCCCCCEEECC
EKARHLYLVPAVGSVEVNGVRVSARDGAAIHGETQLTITALADAELVLVDAA
CCCCEEEEEECCCCEEECCEEEECCCCCEEECCCEEEEEEECCCEEEEEECC
>Mature Secondary Structure
MIELRPFDRLGGADHGWLKAKHHFSFASYYDPNNMGHGALRVWNDDEIAPDTGFPPHPHR
CCCCCCCHHCCCCCCCEEEEEECCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
DMEIITYVRDGAITHQDSLGNKGRTQAGDVQVMSAGSGVRHSEYNLEPETTRIFQIWIEP
CCEEEEEEECCCEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEEE
TQGGGQPTWGSKPFPKADRSGKLVTIASGFASDTDALPIRADARVLATTLKAGETATYDA
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCEEEEEECCCCCCEEECC
EKARHLYLVPAVGSVEVNGVRVSARDGAAIHGETQLTITALADAELVLVDAA
CCCCEEEEEECCCCEEECCEEEECCCCCEEECCCEEEEEEECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]