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The map label for this gene is wrbA [H]

Identifier: 192289406

GI number: 192289406

Start: 1043682

End: 1044281

Strand: Reverse

Name: wrbA [H]

Synonym: Rpal_0979

Alternate gene names: 192289406

Gene position: 1044281-1043682 (Counterclockwise)

Preceding gene: 192289407

Following gene: 192289405

Centisome position: 18.18

GC content: 65.83

Gene sequence:

>600_bases
ATGGCGAAGGTTCTGGTTCTTTACTACTCGGCTTACGGTCACATCGAAGCGATGGCCAACGCGGTCGCCGAAGGCGCGCG
TGAGGCCGGCGCGCAGGTCGACATCAAGCGCGTGCCCGAACTGGTGCCACCGGACGTCGCCAAGGCGTCGCACTACAAGC
TCGATCAAGCCGCGCCGGTCGCGACCATCGAAGACCTCGCCAATTACGACGCGATCGTCATCGGCACCGGCACCCGGTTC
GGTCGCATGGCGTCGCAGATGTCCAACTTCTTGGATCAGGCCGGCGGCCTGTGGGCGCGTGGCGCGCTGAACGGCAAGGT
CGGCGGCGCCTTCACCTCGACCGCCACCCAGCATGGCGGCCAGGAAACCACGCTGTTTTCGATCATCACCAACCTGCTGC
ATTTCGGCATGGTGGTGGTCGGCCTCAATTACGGCTTCGGCGACCAGATGCGGCTCGACCAGGTCACAGGCGGTGCGCCC
TATGGCGCCACCACGATCACCGGCGGCGACGGCTCGCGCCAGCCGAGCGAAACCGAACTCGCCGGCGCGCGCTATCAAGG
CAAGACCATCGCCGAGACCGCCATCAAGCTGCACGGCTGA

Upstream 100 bases:

>100_bases
GAACTCTTGCGAAGACGGATGGATGCGCGGGTCAAGCCCGCGCATGACCACCAACTAACGACACACTCCCCACCCCATCA
CCAACCAAACGGAGACTCCC

Downstream 100 bases:

>100_bases
TCGGGAACGGCGGGGCGCCTAGACCGCGCCCCGCCGCCCTCCGGTCAATTTTAATGCAGATGCATCTATCGCATGCCTGC
TGCGCTGCAGCGGGGCTACT

Product: TrpR binding protein WrbA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MAKVLVLYYSAYGHIEAMANAVAEGAREAGAQVDIKRVPELVPPDVAKASHYKLDQAAPVATIEDLANYDAIVIGTGTRF
GRMASQMSNFLDQAGGLWARGALNGKVGGAFTSTATQHGGQETTLFSIITNLLHFGMVVVGLNYGFGDQMRLDQVTGGAP
YGATTITGGDGSRQPSETELAGARYQGKTIAETAIKLHG

Sequences:

>Translated_199_residues
MAKVLVLYYSAYGHIEAMANAVAEGAREAGAQVDIKRVPELVPPDVAKASHYKLDQAAPVATIEDLANYDAIVIGTGTRF
GRMASQMSNFLDQAGGLWARGALNGKVGGAFTSTATQHGGQETTLFSIITNLLHFGMVVVGLNYGFGDQMRLDQVTGGAP
YGATTITGGDGSRQPSETELAGARYQGKTIAETAIKLHG
>Mature_198_residues
AKVLVLYYSAYGHIEAMANAVAEGAREAGAQVDIKRVPELVPPDVAKASHYKLDQAAPVATIEDLANYDAIVIGTGTRFG
RMASQMSNFLDQAGGLWARGALNGKVGGAFTSTATQHGGQETTLFSIITNLLHFGMVVVGLNYGFGDQMRLDQVTGGAPY
GATTITGGDGSRQPSETELAGARYQGKTIAETAIKLHG

Specific function: Seems To Enhance The Formation And/Or Stability Of Noncovalent Complexes Between The Trp Repressor Protein And Operator-Bearing DNA. However, Wrba Does Not Specifically Influence The Affinity Or Mode Of Binding Of Trpr To Its Operator. It Seems Possible T

COG id: COG0655

COG function: function code R; Multimeric flavodoxin WrbA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787239, Length=200, Percent_Identity=59.5, Blast_Score=222, Evalue=1e-59,
Organism=Saccharomyces cerevisiae, GI6319849, Length=200, Percent_Identity=44.5, Blast_Score=168, Evalue=5e-43,
Organism=Saccharomyces cerevisiae, GI6320235, Length=199, Percent_Identity=43.7185929648241, Blast_Score=159, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6319526, Length=201, Percent_Identity=31.8407960199005, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008254
- InterPro:   IPR010089
- InterPro:   IPR005025 [H]

Pfam domain/function: PF03358 FMN_red [H]

EC number: NA

Molecular weight: Translated: 20821; Mature: 20690

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVLVLYYSAYGHIEAMANAVAEGAREAGAQVDIKRVPELVPPDVAKASHYKLDQAAPV
CCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCCH
ATIEDLANYDAIVIGTGTRFGRMASQMSNFLDQAGGLWARGALNGKVGGAFTSTATQHGG
HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHCCC
QETTLFSIITNLLHFGMVVVGLNYGFGDQMRLDQVTGGAPYGATTITGGDGSRQPSETEL
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHCCCCCCCCCEEEECCCCCCCCCCHHH
AGARYQGKTIAETAIKLHG
CCCCCCCCHHHHHHHEECC
>Mature Secondary Structure 
AKVLVLYYSAYGHIEAMANAVAEGAREAGAQVDIKRVPELVPPDVAKASHYKLDQAAPV
CEEEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCCH
ATIEDLANYDAIVIGTGTRFGRMASQMSNFLDQAGGLWARGALNGKVGGAFTSTATQHGG
HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHCCC
QETTLFSIITNLLHFGMVVVGLNYGFGDQMRLDQVTGGAPYGATTITGGDGSRQPSETEL
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHCCCCCCCCCEEEECCCCCCCCCCHHH
AGARYQGKTIAETAIKLHG
CCCCCCCCHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA