| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289405
Identifier: 192289405
GI number: 192289405
Start: 1043378
End: 1043527
Strand: Reverse
Name: 192289405
Synonym: Rpal_0978
Alternate gene names: NA
Gene position: 1043527-1043378 (Counterclockwise)
Preceding gene: 192289406
Following gene: 192289402
Centisome position: 18.17
GC content: 60.67
Gene sequence:
>150_bases ATGCTCGAGATGGTTTTCATGCTTCAATTGGCGCGCAGCCCGCTGCAGGCGATGGCTAAGCGTATAGTTTGCAAGAGCCT CAGCATCGCCACCTATGGCAAGCGGCATTGCCGAAGCTGCACCGGCGCCACCGCGCCCGACGACGAGTAG
Upstream 100 bases:
>100_bases TGCAGATGCATCTATCGCATGCCTGCTGCGCTGCAGCGGGGCTACTGCGCCCGCTGCTTCGGCACCATCTCCACATTGCT AGCGGCGGGGAGACGACAAC
Downstream 100 bases:
>100_bases TCCGTCCTGCTGCCGCCATCCAGCAAGCCGCTCCCGACGGCGACACGCGGAATTGCCGCCTGCTTCCCTCAGCGCCTCCA ACAGGACAGGGCTTAACCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 49; Mature: 49
Protein sequence:
>49_residues MLEMVFMLQLARSPLQAMAKRIVCKSLSIATYGKRHCRSCTGATAPDDE
Sequences:
>Translated_49_residues MLEMVFMLQLARSPLQAMAKRIVCKSLSIATYGKRHCRSCTGATAPDDE >Mature_49_residues MLEMVFMLQLARSPLQAMAKRIVCKSLSIATYGKRHCRSCTGATAPDDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5431; Mature: 5431
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.1 %Cys (Translated Protein) 8.2 %Met (Translated Protein) 14.3 %Cys+Met (Translated Protein) 6.1 %Cys (Mature Protein) 8.2 %Met (Mature Protein) 14.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEMVFMLQLARSPLQAMAKRIVCKSLSIATYGKRHCRSCTGATAPDDE CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MLEMVFMLQLARSPLQAMAKRIVCKSLSIATYGKRHCRSCTGATAPDDE CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA