| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
Click here to switch to the map view.
The map label for this gene is 192289402
Identifier: 192289402
GI number: 192289402
Start: 1041159
End: 1042046
Strand: Reverse
Name: 192289402
Synonym: Rpal_0975
Alternate gene names: NA
Gene position: 1042046-1041159 (Counterclockwise)
Preceding gene: 192289405
Following gene: 192289401
Centisome position: 18.14
GC content: 64.98
Gene sequence:
>888_bases ATGACCGAGTTCGACGGTGAGTTCTCCCCCGCCTTCGAGATCGCCGAACCGGCGGTCTGGCGCGCCCCGATCATTTTCAA TTCGCCGCATTCCGGCTCGGTCTATCCGAACGCCTTCCTGAACGCCTCGCGGATCGATCTCGAAGCGCTGCAGCGCTCCG AAGATTCGTTCATGGACGAGCTGATCGGCCACCTGATTCACGACGGCTTTTCGGTGGTCCGGGTGCATTTCCCGCGCTCC TATATCGACGTCAATCGCGAGCCTTACGAACTCGATCCCAGGATGTTCAACGGCCGGCTGCCGAGTTTTGCCAACACCCG CTCGATGCGGGTCGCCGGCGGGCTGGGCACGATCCCGCGTGTGGTCGGCGACGGCCAGGAGATCTACCACGAGCGCATCC ACATCGATGACGCGCTCGGCCGGATCGAGACGCTGTACAAGCCGTATCACCGCGCGCTGCGCCGGCTGATCAACCAGGCG CACCAGCAGTTCGGCTCGGTGATCCTGGTCGACTGCCATTCGATGCCGTCGGTCGGCATCTCGCGCGACGAGCCGAAACG GCCGGACGTGGTGATCGGCGATCGCTACGGCACCAGTTGCTCGCCGCTGATCGCCACCGTGATCGAAGAGACGATGGCGG CGCGCGGCTATTCGACCGGTCGCAACAAGCCTTATGCGGGCGGCTTCATCACCGAGCATTACGGCAGCCCGGCCACCGGG CTGCACACCGTGCAGGTCGAGCTCAACCGGGCGATCTACATGGACGAGCGGCTGCGGCTGCGCAGCGACCGCTTTGCCAC CGTGGCGGAGGATTTCAGCCGCCTCGCCGAGAGGCTGGCCGAGATACCGCTGGACGATCTCCGCCCCTTTCAGGCGGCGG CAGAGTAA
Upstream 100 bases:
>100_bases GGCAGCGTCGGCCCGATTGCCGACAATACCGCTCACCAAATCACCAGACGCGCTGTCGCACAGGCAGGAGACCGGCGGAT TTGACGGGTGGCGGACGAAA
Downstream 100 bases:
>100_bases ACAGGCGGGCGGCCGGGCCGCTGTCTTCTCGCTCATCCCATGCCATCAATCTTTAACCACAAAGACGGGAACCGATTCAG CCCGCATTAACGCGGAACCT
Product: N-formylglutamate amidohydrolase
Products: NA
Alternate protein names: N-Formylglutamate Deformylase; Formiminoglutamase; Hydrolase; N-Formylglutamate Amidohydrolase Family Protein; Formylglutamate Amidohydrolase; N-Formylglutamate Amidohydrolase Superfamily; Formiminoglutamase Protein; N-Formylglutamate Amidohydrolase Family; Amidohydrolase; N-Formylglutamate Amidohydrolase HutG; N-Formylglutamate Deformylase Family Protein; Formylglutamte Amindohyrolase; N-Formylglutamate Amidohydrolase Protein; N-Formylglutamate_deformylase Protein
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MTEFDGEFSPAFEIAEPAVWRAPIIFNSPHSGSVYPNAFLNASRIDLEALQRSEDSFMDELIGHLIHDGFSVVRVHFPRS YIDVNREPYELDPRMFNGRLPSFANTRSMRVAGGLGTIPRVVGDGQEIYHERIHIDDALGRIETLYKPYHRALRRLINQA HQQFGSVILVDCHSMPSVGISRDEPKRPDVVIGDRYGTSCSPLIATVIEETMAARGYSTGRNKPYAGGFITEHYGSPATG LHTVQVELNRAIYMDERLRLRSDRFATVAEDFSRLAERLAEIPLDDLRPFQAAAE
Sequences:
>Translated_295_residues MTEFDGEFSPAFEIAEPAVWRAPIIFNSPHSGSVYPNAFLNASRIDLEALQRSEDSFMDELIGHLIHDGFSVVRVHFPRS YIDVNREPYELDPRMFNGRLPSFANTRSMRVAGGLGTIPRVVGDGQEIYHERIHIDDALGRIETLYKPYHRALRRLINQA HQQFGSVILVDCHSMPSVGISRDEPKRPDVVIGDRYGTSCSPLIATVIEETMAARGYSTGRNKPYAGGFITEHYGSPATG LHTVQVELNRAIYMDERLRLRSDRFATVAEDFSRLAERLAEIPLDDLRPFQAAAE >Mature_294_residues TEFDGEFSPAFEIAEPAVWRAPIIFNSPHSGSVYPNAFLNASRIDLEALQRSEDSFMDELIGHLIHDGFSVVRVHFPRSY IDVNREPYELDPRMFNGRLPSFANTRSMRVAGGLGTIPRVVGDGQEIYHERIHIDDALGRIETLYKPYHRALRRLINQAH QQFGSVILVDCHSMPSVGISRDEPKRPDVVIGDRYGTSCSPLIATVIEETMAARGYSTGRNKPYAGGFITEHYGSPATGL HTVQVELNRAIYMDERLRLRSDRFATVAEDFSRLAERLAEIPLDDLRPFQAAAE
Specific function: Unknown
COG id: COG3741
COG function: function code E; N-formylglutamate amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33218; Mature: 33087
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEFDGEFSPAFEIAEPAVWRAPIIFNSPHSGSVYPNAFLNASRIDLEALQRSEDSFMDE CCCCCCCCCCCHHHCCCCCEECCEEEECCCCCCCCCHHHCCCHHHHHHHHHCCHHHHHHH LIGHLIHDGFSVVRVHFPRSYIDVNREPYELDPRMFNGRLPSFANTRSMRVAGGLGTIPR HHHHHHHCCCEEEEEECCHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCEEEECCCCCHHH VVGDGQEIYHERIHIDDALGRIETLYKPYHRALRRLINQAHQQFGSVILVDCHSMPSVGI HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCC SRDEPKRPDVVIGDRYGTSCSPLIATVIEETMAARGYSTGRNKPYAGGFITEHYGSPATG CCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCC LHTVQVELNRAIYMDERLRLRSDRFATVAEDFSRLAERLAEIPLDDLRPFQAAAE EEEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHCC >Mature Secondary Structure TEFDGEFSPAFEIAEPAVWRAPIIFNSPHSGSVYPNAFLNASRIDLEALQRSEDSFMDE CCCCCCCCCCHHHCCCCCEECCEEEECCCCCCCCCHHHCCCHHHHHHHHHCCHHHHHHH LIGHLIHDGFSVVRVHFPRSYIDVNREPYELDPRMFNGRLPSFANTRSMRVAGGLGTIPR HHHHHHHCCCEEEEEECCHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCEEEECCCCCHHH VVGDGQEIYHERIHIDDALGRIETLYKPYHRALRRLINQAHQQFGSVILVDCHSMPSVGI HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCC SRDEPKRPDVVIGDRYGTSCSPLIATVIEETMAARGYSTGRNKPYAGGFITEHYGSPATG CCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCC LHTVQVELNRAIYMDERLRLRSDRFATVAEDFSRLAERLAEIPLDDLRPFQAAAE EEEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA