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The map label for this gene is yjnA [H]

Identifier: 192289309

GI number: 192289309

Start: 937160

End: 938122

Strand: Reverse

Name: yjnA [H]

Synonym: Rpal_0881

Alternate gene names: 192289309

Gene position: 938122-937160 (Counterclockwise)

Preceding gene: 192289310

Following gene: 192289308

Centisome position: 16.33

GC content: 67.29

Gene sequence:

>963_bases
ATGCTGTCGTCACAGCGAGAACTCCGAAGCGAACCGCGCGTGCAGCTCTATCTCCCGATCGCCGATCTTCCGGTCAACGT
CCTGCTCGTGCTGGCGATGGGCGCTGCGGTCGGGTTCGTGTCCGGAATGTTCGGCGTCGGCGGCGGATTCCTGATGACGC
CGCTGCTGATCTTCATCGGCATCTCGCCCGCGGTCGCGGTCGCCTCGGTGACCAGCCACATGGCGGCGTCCTCGTTCTCC
GGTGCGCTGTCGTACTGGCGCCGCCGGGCAATCGATCCTCTCCTCGCCTTCGTCCTGTTATGCGGCGGCATCGCCGGCAC
CGGGCTCGGCGTCTGGTTCTTCGTGCTGATGCGCGCGGTCGGCCAGCTCGACTTGGTGATCGCGGTGTCCTACGTCGTGC
TGCTGACCTCGGTCGGCGGTCTGATGGTTTACGAAGGCATCCGCGCGATCCGTCGCTCCAACCGCGGTGAGGTGCCGCTG
GCGGGCCGCTCCGGCAACCGCAACTGGCTGTACGCGCTGCCGTTCAAGGTCCGGTTCAAGCGCTCCAAGATCTATCTGTC
GGTGCTGCCGGTGGTGGCGATCGGCGTGCTGATCGGCTTCATCGGCGCCGTGATGGGCGTCGGCGGCGGCTTCATCCTGG
TTCCGATGCTGATCTATTTGCTGCGGGTGCCGACCAGCACCGTGGTGGGTACCTCGATGGTGCTGACCCTGGTGACGATG
CTGATCGCCACAGTGCTGCATGCCGCCACCAGCCACCTGGTCGACGCGGTGCTGGCGTTGATCCTGATGATCGGCGGTGT
CACCGGTGCGCAGTTCGGCGCCCGCGCGGGCCAGCGCATCCGCGGCGAACAGCTCCGCCTGCTGCTCGGCCTGCTCGTGC
TGGCGGTCGGCGTCCGCTTCGCGATCGAGCTCGGCATCCGCCCCGCCGAGCTGTTCACGCTGCGCGAACTGAGCCCGTCA
TGA

Upstream 100 bases:

>100_bases
GAAGTCCGCCATGCCGGTCCGGCCAAGCGGTCCTGATCTGTTGCCGGATCATTGAATCAAGAACATCTCCGGGGCGAAGC
GCCAGCCGTTGAGCCGGGGG

Downstream 100 bases:

>100_bases
TGGCGCGGCGGCTCACATCGCTCCGCGCGATTGCCACCGCCGGGCTGCTGGCGCTGATGCTGCCGTTCGCCTCGCCGGCG
GATGCGGAACGGCTGATCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MLSSQRELRSEPRVQLYLPIADLPVNVLLVLAMGAAVGFVSGMFGVGGGFLMTPLLIFIGISPAVAVASVTSHMAASSFS
GALSYWRRRAIDPLLAFVLLCGGIAGTGLGVWFFVLMRAVGQLDLVIAVSYVVLLTSVGGLMVYEGIRAIRRSNRGEVPL
AGRSGNRNWLYALPFKVRFKRSKIYLSVLPVVAIGVLIGFIGAVMGVGGGFILVPMLIYLLRVPTSTVVGTSMVLTLVTM
LIATVLHAATSHLVDAVLALILMIGGVTGAQFGARAGQRIRGEQLRLLLGLLVLAVGVRFAIELGIRPAELFTLRELSPS

Sequences:

>Translated_320_residues
MLSSQRELRSEPRVQLYLPIADLPVNVLLVLAMGAAVGFVSGMFGVGGGFLMTPLLIFIGISPAVAVASVTSHMAASSFS
GALSYWRRRAIDPLLAFVLLCGGIAGTGLGVWFFVLMRAVGQLDLVIAVSYVVLLTSVGGLMVYEGIRAIRRSNRGEVPL
AGRSGNRNWLYALPFKVRFKRSKIYLSVLPVVAIGVLIGFIGAVMGVGGGFILVPMLIYLLRVPTSTVVGTSMVLTLVTM
LIATVLHAATSHLVDAVLALILMIGGVTGAQFGARAGQRIRGEQLRLLLGLLVLAVGVRFAIELGIRPAELFTLRELSPS
>Mature_320_residues
MLSSQRELRSEPRVQLYLPIADLPVNVLLVLAMGAAVGFVSGMFGVGGGFLMTPLLIFIGISPAVAVASVTSHMAASSFS
GALSYWRRRAIDPLLAFVLLCGGIAGTGLGVWFFVLMRAVGQLDLVIAVSYVVLLTSVGGLMVYEGIRAIRRSNRGEVPL
AGRSGNRNWLYALPFKVRFKRSKIYLSVLPVVAIGVLIGFIGAVMGVGGGFILVPMLIYLLRVPTSTVVGTSMVLTLVTM
LIATVLHAATSHLVDAVLALILMIGGVTGAQFGARAGQRIRGEQLRLLLGLLVLAVGVRFAIELGIRPAELFTLRELSPS

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 33901; Mature: 33901

Theoretical pI: Translated: 11.61; Mature: 11.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSSQRELRSEPRVQLYLPIADLPVNVLLVLAMGAAVGFVSGMFGVGGGFLMTPLLIFIG
CCCCCHHHHCCCCEEEEEEHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
ISPAVAVASVTSHMAASSFSGALSYWRRRAIDPLLAFVLLCGGIAGTGLGVWFFVLMRAV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
GQLDLVIAVSYVVLLTSVGGLMVYEGIRAIRRSNRGEVPLAGRSGNRNWLYALPFKVRFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEEH
RSKIYLSVLPVVAIGVLIGFIGAVMGVGGGFILVPMLIYLLRVPTSTVVGTSMVLTLVTM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LIATVLHAATSHLVDAVLALILMIGGVTGAQFGARAGQRIRGEQLRLLLGLLVLAVGVRF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
AIELGIRPAELFTLRELSPS
HHHHCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MLSSQRELRSEPRVQLYLPIADLPVNVLLVLAMGAAVGFVSGMFGVGGGFLMTPLLIFIG
CCCCCHHHHCCCCEEEEEEHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
ISPAVAVASVTSHMAASSFSGALSYWRRRAIDPLLAFVLLCGGIAGTGLGVWFFVLMRAV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
GQLDLVIAVSYVVLLTSVGGLMVYEGIRAIRRSNRGEVPLAGRSGNRNWLYALPFKVRFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEEH
RSKIYLSVLPVVAIGVLIGFIGAVMGVGGGFILVPMLIYLLRVPTSTVVGTSMVLTLVTM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LIATVLHAATSHLVDAVLALILMIGGVTGAQFGARAGQRIRGEQLRLLLGLLVLAVGVRF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
AIELGIRPAELFTLRELSPS
HHHHCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]