| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is cya [H]
Identifier: 192289282
GI number: 192289282
Start: 905045
End: 906439
Strand: Reverse
Name: cya [H]
Synonym: Rpal_0854
Alternate gene names: 192289282
Gene position: 906439-905045 (Counterclockwise)
Preceding gene: 192289285
Following gene: 192289281
Centisome position: 15.78
GC content: 69.25
Gene sequence:
>1395_bases ATGGGGAATTCCGCCAGCCGGGGCAAGATCGCTTCGTGCGGCAGGCCGTCGCGGCTCGCCGCCGCCGCAATCCTCAACGA AAGTTCCTGTGTGACCGATCCGACCGCACCACCCGACGCGATGCGCGTCTATCCCGCCGGCGTCAGCGTCGTCCGCCGCA GCCAGCGCGGCCGTGCCTGTCTGCCCGCCAGCATCACGCTGGCCGAGCTGGAAACCTGGCTGCTGCACGACGCCGCGGCC GAGCCAGAAATGCTGCTGACGTTCGAATCGCTGATGTGGCGGATGACCGCGGTCGGGCTGCCGGTGCATCGCGCCACGCT GCACATCCGCACGCTGCATCCGCAGCTGCTCGGCTTCGCCTGGAACTGGCGCGCCTCCGACGGGCTGTGCGACGAAGTCC AGGTCAACCAATCGACCGCCGACACCGACGCATTCCGGCTCAATCCGCTGCACAACCTGTTCCAGGGCGGCAAGGCGATC CGGCGCAATCCGCAGGACGCCGCCGCGCAGGCGGAATTCCCGATCATGCGCGACCTCGCGGCCGGCGGTTACACCGAGTA CCTGGCGCTGCCGATGGGCGGCGACCGCTTCCGCCACGCCGTTACGTTGGCAACCATGCAGCCCGGCGGCTTCACCGACG AGCACCTCGCGCTGTTTCAGCGGCTGCTGACGCTGTTCGGCCTGCATGTCGGCCGCCACGTCGCCACCCGGATCGCCATC AACGCGCTCGGCGCCTATCTCGGCCCGGTGGCCGGCGCCAAGGTGCTGAGCGGCGACATCAAGCGCGGCGCCGGCGAGCC GATCCGCGCCATCATCTGGATGTCGGACCTGCGCGGCTTCACCGATCTGTCCGACCGGCTGTGCGGCAACGACATGATCG CGCTGCTGAACGCTTACTTCGAGGTGTTCGCCGACGCGGTGCTGCGCAACGGCGGCGACGTCCTGAAGTTCATCGGTGAC GGGCTGCTGGCGGTGTTTCCGCTCGGCGATGATTCGCGCGTCGCCGGTAACGCGGCGCTGACGGCCGCGATCGAGGCGCA GGCGGGGCTGGGACGACTCAACCTGGTCGATCCGGCCGGCGTGAATTGCGAAGGCTGGCGTCCGCTCCGCGCTGGCATCG CGCTGCACGAAGGCGAAGTGTTCTTCGGCAATATCGGCGCCGCCGAACGCCTCGACTTCACCGTGATCGGACCGGCGGTG AACGAAGCCAGCCGGGTCGAGGCGCTGCAAAAGAGCACCGGGCGCAGTATCCTGGTGACGGCGGCGGCCGCGACCCATAT CGACGCACCGCTGGAGCCGCTCGGGGACTACCCGCTGCGCGGCGTCACCGTGCCGATGACGATCTTCAGCCCGCCCGAAC AGCCGCTCCGGCAGCCGCTGGCCGCTGCGTCATAA
Upstream 100 bases:
>100_bases GCGGTCAGGCCGGCCAGCAAGAGAGCGGTTTTGAAGTAACTCATGGTCCTCCTCCTGCGTCTCCACTCCTGCAAGGGAGC CTGGATAACGCATCCGTGAG
Downstream 100 bases:
>100_bases TCCTCGCCGCCTCGGATTGGCCTTGCCAAGTCGAGCGGACGCCTCCTATTTTCAACTGCAATGCGCCACAGAACGGGGGC ACACCTCCGCACGGCCGATA
Product: adenylate/guanylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase; Adenylyl cyclase [H]
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MGNSASRGKIASCGRPSRLAAAAILNESSCVTDPTAPPDAMRVYPAGVSVVRRSQRGRACLPASITLAELETWLLHDAAA EPEMLLTFESLMWRMTAVGLPVHRATLHIRTLHPQLLGFAWNWRASDGLCDEVQVNQSTADTDAFRLNPLHNLFQGGKAI RRNPQDAAAQAEFPIMRDLAAGGYTEYLALPMGGDRFRHAVTLATMQPGGFTDEHLALFQRLLTLFGLHVGRHVATRIAI NALGAYLGPVAGAKVLSGDIKRGAGEPIRAIIWMSDLRGFTDLSDRLCGNDMIALLNAYFEVFADAVLRNGGDVLKFIGD GLLAVFPLGDDSRVAGNAALTAAIEAQAGLGRLNLVDPAGVNCEGWRPLRAGIALHEGEVFFGNIGAAERLDFTVIGPAV NEASRVEALQKSTGRSILVTAAAATHIDAPLEPLGDYPLRGVTVPMTIFSPPEQPLRQPLAAAS
Sequences:
>Translated_464_residues MGNSASRGKIASCGRPSRLAAAAILNESSCVTDPTAPPDAMRVYPAGVSVVRRSQRGRACLPASITLAELETWLLHDAAA EPEMLLTFESLMWRMTAVGLPVHRATLHIRTLHPQLLGFAWNWRASDGLCDEVQVNQSTADTDAFRLNPLHNLFQGGKAI RRNPQDAAAQAEFPIMRDLAAGGYTEYLALPMGGDRFRHAVTLATMQPGGFTDEHLALFQRLLTLFGLHVGRHVATRIAI NALGAYLGPVAGAKVLSGDIKRGAGEPIRAIIWMSDLRGFTDLSDRLCGNDMIALLNAYFEVFADAVLRNGGDVLKFIGD GLLAVFPLGDDSRVAGNAALTAAIEAQAGLGRLNLVDPAGVNCEGWRPLRAGIALHEGEVFFGNIGAAERLDFTVIGPAV NEASRVEALQKSTGRSILVTAAAATHIDAPLEPLGDYPLRGVTVPMTIFSPPEQPLRQPLAAAS >Mature_463_residues GNSASRGKIASCGRPSRLAAAAILNESSCVTDPTAPPDAMRVYPAGVSVVRRSQRGRACLPASITLAELETWLLHDAAAE PEMLLTFESLMWRMTAVGLPVHRATLHIRTLHPQLLGFAWNWRASDGLCDEVQVNQSTADTDAFRLNPLHNLFQGGKAIR RNPQDAAAQAEFPIMRDLAAGGYTEYLALPMGGDRFRHAVTLATMQPGGFTDEHLALFQRLLTLFGLHVGRHVATRIAIN ALGAYLGPVAGAKVLSGDIKRGAGEPIRAIIWMSDLRGFTDLSDRLCGNDMIALLNAYFEVFADAVLRNGGDVLKFIGDG LLAVFPLGDDSRVAGNAALTAAIEAQAGLGRLNLVDPAGVNCEGWRPLRAGIALHEGEVFFGNIGAAERLDFTVIGPAVN EASRVEALQKSTGRSILVTAAAATHIDAPLEPLGDYPLRGVTVPMTIFSPPEQPLRQPLAAAS
Specific function: May function as a membrane-localized receptor protein [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HAMP domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR003660 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00672 HAMP [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 49457; Mature: 49326
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNSASRGKIASCGRPSRLAAAAILNESSCVTDPTAPPDAMRVYPAGVSVVRRSQRGRAC CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCEE LPASITLAELETWLLHDAAAEPEMLLTFESLMWRMTAVGLPVHRATLHIRTLHPQLLGFA CCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECHHHHCEE WNWRASDGLCDEVQVNQSTADTDAFRLNPLHNLFQGGKAIRRNPQDAAAQAEFPIMRDLA EECCCCCCCCCCEEECCCCCCCCCEEECHHHHHHHCCHHHHCCCHHHHHHCCCCHHHHHH AGGYTEYLALPMGGDRFRHAVTLATMQPGGFTDEHLALFQRLLTLFGLHVGRHVATRIAI CCCCEEEEEECCCCHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH NALGAYLGPVAGAKVLSGDIKRGAGEPIRAIIWMSDLRGFTDLSDRLCGNDMIALLNAYF HHHHHHHHHHCCHHHHHCHHHCCCCCCEEEEEEHHHCCCCHHHHHHHCCCHHHHHHHHHH EVFADAVLRNGGDVLKFIGDGLLAVFPLGDDSRVAGNAALTAAIEAQAGLGRLNLVDPAG HHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCEEECCCCC VNCEGWRPLRAGIALHEGEVFFGNIGAAERLDFTVIGPAVNEASRVEALQKSTGRSILVT CCCCCCCHHHHCEEEECCCEEEECCCCCHHCEEEEECCCCCHHHHHHHHHHCCCCEEEEE AAAATHIDAPLEPLGDYPLRGVTVPMTIFSPPEQPLRQPLAAAS EEHHHHCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCC >Mature Secondary Structure GNSASRGKIASCGRPSRLAAAAILNESSCVTDPTAPPDAMRVYPAGVSVVRRSQRGRAC CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCEE LPASITLAELETWLLHDAAAEPEMLLTFESLMWRMTAVGLPVHRATLHIRTLHPQLLGFA CCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECHHHHCEE WNWRASDGLCDEVQVNQSTADTDAFRLNPLHNLFQGGKAIRRNPQDAAAQAEFPIMRDLA EECCCCCCCCCCEEECCCCCCCCCEEECHHHHHHHCCHHHHCCCHHHHHHCCCCHHHHHH AGGYTEYLALPMGGDRFRHAVTLATMQPGGFTDEHLALFQRLLTLFGLHVGRHVATRIAI CCCCEEEEEECCCCHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH NALGAYLGPVAGAKVLSGDIKRGAGEPIRAIIWMSDLRGFTDLSDRLCGNDMIALLNAYF HHHHHHHHHHCCHHHHHCHHHCCCCCCEEEEEEHHHCCCCHHHHHHHCCCHHHHHHHHHH EVFADAVLRNGGDVLKFIGDGLLAVFPLGDDSRVAGNAALTAAIEAQAGLGRLNLVDPAG HHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCEEECCCCC VNCEGWRPLRAGIALHEGEVFFGNIGAAERLDFTVIGPAVNEASRVEALQKSTGRSILVT CCCCCCCHHHHCEEEECCCEEEECCCCCHHCEEEEECCCCCHHHHHHHHHHCCCCEEEEE AAAATHIDAPLEPLGDYPLRGVTVPMTIFSPPEQPLRQPLAAAS EEHHHHCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7601856 [H]