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The map label for this gene is 192288965

Identifier: 192288965

GI number: 192288965

Start: 583269

End: 583790

Strand: Reverse

Name: 192288965

Synonym: Rpal_0535

Alternate gene names: NA

Gene position: 583790-583269 (Counterclockwise)

Preceding gene: 192288966

Following gene: 192288961

Centisome position: 10.16

GC content: 67.82

Gene sequence:

>522_bases
ATGCGTAGCATCATGATTTTCGCCGCAGCCCTCGTGGTGCTCGGCACCGCGATGGCCCAAATCGCCGACCGGATTACCCC
GGCTCCGGCGCAGGCCCATGCCGCCCCTCACGGCACCATCGGCACGGCGGCAGCGACTCCCGAAACCTATGGCCGCAGCA
TCAGCATCGACCGCGACCCGCGCGGCCACTTCCGCACCGATGGCCGGATCGACGGCCAGCGACTGTCGTTCATGGTCGAC
ACCGGCGCCTCGGTGGTCGCTCTCAACGAAAGCTCGGCGGCGCGGTTCGGTTTGCGGCCGTCGCGCGGCGACTACACCGC
CAAGGTCTCGACCGCGAACGGCCAGGTGAAAGCCGCGCGCGCGCGCATCGCGATGCTGGACGTCGGCGGCCTGATCGTGC
GCGACGTCGATGCGCTGGTACTTCCCGACGAAGCGCTGTCGGAGAACCTGCTCGGCCTGTCGTATCTGTCGAAGCTGAAG
CGCTTCGCCTATGCCGACGGCCGGATGGTTCTCGAGCAGTAA

Upstream 100 bases:

>100_bases
GTTTTCGCCAAAAACATCCGGATGCATCGGACGCCGCGGTCGCGTCCGGCATCCGCGCGTGATCCAATCTGCGCGGCGAC
GGACTGTGTGAGTAGGCGTT

Downstream 100 bases:

>100_bases
GGCCGCTGTTTAAGCACCGTCAGCCGCGCTTGAGCATGTCCTTGGCGGCGAGCAGGCCGCCGCCTGCAATCAGAAGCGCC
GCAACCGCCAGCGCGGTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MRSIMIFAAALVVLGTAMAQIADRITPAPAQAHAAPHGTIGTAAATPETYGRSISIDRDPRGHFRTDGRIDGQRLSFMVD
TGASVVALNESSAARFGLRPSRGDYTAKVSTANGQVKAARARIAMLDVGGLIVRDVDALVLPDEALSENLLGLSYLSKLK
RFAYADGRMVLEQ

Sequences:

>Translated_173_residues
MRSIMIFAAALVVLGTAMAQIADRITPAPAQAHAAPHGTIGTAAATPETYGRSISIDRDPRGHFRTDGRIDGQRLSFMVD
TGASVVALNESSAARFGLRPSRGDYTAKVSTANGQVKAARARIAMLDVGGLIVRDVDALVLPDEALSENLLGLSYLSKLK
RFAYADGRMVLEQ
>Mature_173_residues
MRSIMIFAAALVVLGTAMAQIADRITPAPAQAHAAPHGTIGTAAATPETYGRSISIDRDPRGHFRTDGRIDGQRLSFMVD
TGASVVALNESSAARFGLRPSRGDYTAKVSTANGQVKAARARIAMLDVGGLIVRDVDALVLPDEALSENLLGLSYLSKLK
RFAYADGRMVLEQ

Specific function: Unknown

COG id: COG3577

COG function: function code R; Predicted aspartyl protease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011969
- InterPro:   IPR021109
- InterPro:   IPR001969 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18340; Mature: 18340

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSIMIFAAALVVLGTAMAQIADRITPAPAQAHAAPHGTIGTAAATPETYGRSISIDRDP
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEECCCC
RGHFRTDGRIDGQRLSFMVDTGASVVALNESSAARFGLRPSRGDYTAKVSTANGQVKAAR
CCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCHHCCCCCCCCCEEEEEECCCCCEEEHH
ARIAMLDVGGLIVRDVDALVLPDEALSENLLGLSYLSKLKRFAYADGRMVLEQ
HEEEEEECCCEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
>Mature Secondary Structure
MRSIMIFAAALVVLGTAMAQIADRITPAPAQAHAAPHGTIGTAAATPETYGRSISIDRDP
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEECCCC
RGHFRTDGRIDGQRLSFMVDTGASVVALNESSAARFGLRPSRGDYTAKVSTANGQVKAAR
CCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCHHCCCCCCCCCEEEEEECCCCCEEEHH
ARIAMLDVGGLIVRDVDALVLPDEALSENLLGLSYLSKLKRFAYADGRMVLEQ
HEEEEEECCCEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1917841 [H]