Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192288926

Identifier: 192288926

GI number: 192288926

Start: 539349

End: 540497

Strand: Reverse

Name: 192288926

Synonym: Rpal_0496

Alternate gene names: NA

Gene position: 540497-539349 (Counterclockwise)

Preceding gene: 192288927

Following gene: 192288923

Centisome position: 9.41

GC content: 67.1

Gene sequence:

>1149_bases
ATGAACGCTCCGCGGGGCGAGGCTGGGAAGCAGAGCGACCACACCGCGACAGAGGACGGTCGCGCGGCTGCTGCCGCACA
GGACTTCGCCACGACGACGCGTCGCCATTTACTTGCGGGCGGCCTGTGGCTTGGCGGCGCCGCCACGTTGGCCGGTTTCG
TGCCGACCCTGGCGCTGGCGCAAACCAAACCGGTCGAAGCCGACGAGCTGACTCCGCCGGCACCGCGTTCGATCGAGGTG
CGGGCCCGCCCGATCGATCACTTCGATCTGCGCGACCGCGCCCATCGCCAGTTCGGTGCGCTGCAGTTTCGCAGCGGCCT
GATCCTGACCTCCGGTTTCCGCGGCTTCGGCGGGCTATCCGCGCTGCGGCTCGATCCCCGCGGCGAGCGGTTCGTTGCGA
TCAGCGACAAGGCCACCTGGTTCACCGGCCGCATCGTCTATGACGGAACGGCGCTGAGCGGTCTTGCCGACGTCGAGGCG
GCGCCGCTGCTCGGCCCTGACGGCAAACCGCTGCGGTCACGTAAGTGGTACGACAGCGAGTCGCTCGCATTCGACGGCGG
CACGGCCTATGTGGGCTTCGAGCGGGTCAACCAGATCGTCAAATTCGACTTCGGGCGCGACGGCATCCGCGCGCGTGGCC
AGCCGATCGCGGTGCCCCCGGCGCTGCGCAAGCTACCGAACAACAAGGGCATCGAATCGCTGGTGATGGTGCCGAAGCCG
CACCCGCTGGCCGGCACGCTGATCGCGCTGTCCGAGCGCGGCCTCGATGCCGAGCGCAACACCATCGGCTTCCTGATTGG
CGGCAAGTCTCCCGGGCAGTTCTCGGTCCGCCGCACTGAGAACTACGACATTGCCGACGCTGCTCTGATGCATGGCGGCG
AGCTGTTGATCCTGGAGCGCAAGTTCTCCTGGTTCGAGGGCGTGCACATCCGCATCCGGCGGATTGCGCTGAGCACGATC
GTGCCGGGCGCGACCGTGGACGGCCCGTCGATCTTCGAGGCCGACCTCGGCAACGAGATCGACAACATGGAAGGGCTCGA
CGTCCATATCGACGCCGGCGGCGCGATCGTGCTGACGATGGTGTCGGACGACAATTTCTCGATGCTGCAGCGAACCCTGC
TGCTGCAATTCACGCTGGAAGCCGACTAA

Upstream 100 bases:

>100_bases
GCTCGCCGAGCTGTTCAGCGAGACCGCCACCCCGGCCGCGACACCGGGCCCGCGACGCCACCGTCTGCATTCGTGAGCGC
TCTTGGGCTGAGATGAGCCG

Downstream 100 bases:

>100_bases
CCCGCCGATCTTTACTTAGCGGCTCAGGCCGGCCGTGCCGCTGCTGCCCTGCTCGGCTTCGCCGGCTCGGCGGCGGTGGT
GGTGGTCGATCGCGCCGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MNAPRGEAGKQSDHTATEDGRAAAAAQDFATTTRRHLLAGGLWLGGAATLAGFVPTLALAQTKPVEADELTPPAPRSIEV
RARPIDHFDLRDRAHRQFGALQFRSGLILTSGFRGFGGLSALRLDPRGERFVAISDKATWFTGRIVYDGTALSGLADVEA
APLLGPDGKPLRSRKWYDSESLAFDGGTAYVGFERVNQIVKFDFGRDGIRARGQPIAVPPALRKLPNNKGIESLVMVPKP
HPLAGTLIALSERGLDAERNTIGFLIGGKSPGQFSVRRTENYDIADAALMHGGELLILERKFSWFEGVHIRIRRIALSTI
VPGATVDGPSIFEADLGNEIDNMEGLDVHIDAGGAIVLTMVSDDNFSMLQRTLLLQFTLEAD

Sequences:

>Translated_382_residues
MNAPRGEAGKQSDHTATEDGRAAAAAQDFATTTRRHLLAGGLWLGGAATLAGFVPTLALAQTKPVEADELTPPAPRSIEV
RARPIDHFDLRDRAHRQFGALQFRSGLILTSGFRGFGGLSALRLDPRGERFVAISDKATWFTGRIVYDGTALSGLADVEA
APLLGPDGKPLRSRKWYDSESLAFDGGTAYVGFERVNQIVKFDFGRDGIRARGQPIAVPPALRKLPNNKGIESLVMVPKP
HPLAGTLIALSERGLDAERNTIGFLIGGKSPGQFSVRRTENYDIADAALMHGGELLILERKFSWFEGVHIRIRRIALSTI
VPGATVDGPSIFEADLGNEIDNMEGLDVHIDAGGAIVLTMVSDDNFSMLQRTLLLQFTLEAD
>Mature_382_residues
MNAPRGEAGKQSDHTATEDGRAAAAAQDFATTTRRHLLAGGLWLGGAATLAGFVPTLALAQTKPVEADELTPPAPRSIEV
RARPIDHFDLRDRAHRQFGALQFRSGLILTSGFRGFGGLSALRLDPRGERFVAISDKATWFTGRIVYDGTALSGLADVEA
APLLGPDGKPLRSRKWYDSESLAFDGGTAYVGFERVNQIVKFDFGRDGIRARGQPIAVPPALRKLPNNKGIESLVMVPKP
HPLAGTLIALSERGLDAERNTIGFLIGGKSPGQFSVRRTENYDIADAALMHGGELLILERKFSWFEGVHIRIRRIALSTI
VPGATVDGPSIFEADLGNEIDNMEGLDVHIDAGGAIVLTMVSDDNFSMLQRTLLLQFTLEAD

Specific function: Unknown

COG id: COG4246

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41217; Mature: 41217

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPRGEAGKQSDHTATEDGRAAAAAQDFATTTRRHLLAGGLWLGGAATLAGFVPTLALA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHH
QTKPVEADELTPPAPRSIEVRARPIDHFDLRDRAHRQFGALQFRSGLILTSGFRGFGGLS
CCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCEEECCCEEEECCCCCCCCCE
ALRLDPRGERFVAISDKATWFTGRIVYDGTALSGLADVEAAPLLGPDGKPLRSRKWYDSE
EEEECCCCCEEEEEECCCEEEEEEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SLAFDGGTAYVGFERVNQIVKFDFGRDGIRARGQPIAVPPALRKLPNNKGIESLVMVPKP
CEEECCCEEEEEHHHHHHHEEECCCCCCCCCCCCCEECCHHHHHCCCCCCCCEEEECCCC
HPLAGTLIALSERGLDAERNTIGFLIGGKSPGQFSVRRTENYDIADAALMHGGELLILER
CCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEECCCCCHHHHHHHCCCEEEEEEE
KFSWFEGVHIRIRRIALSTIVPGATVDGPSIFEADLGNEIDNMEGLDVHIDAGGAIVLTM
CCCCCCCEEEEEEEEEHHHHCCCCCCCCCCEEEHHCCCCCCCCCCCEEEEECCCEEEEEE
VSDDNFSMLQRTLLLQFTLEAD
EECCCHHHHHHEEEEEEEEECC
>Mature Secondary Structure
MNAPRGEAGKQSDHTATEDGRAAAAAQDFATTTRRHLLAGGLWLGGAATLAGFVPTLALA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHH
QTKPVEADELTPPAPRSIEVRARPIDHFDLRDRAHRQFGALQFRSGLILTSGFRGFGGLS
CCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCEEECCCEEEECCCCCCCCCE
ALRLDPRGERFVAISDKATWFTGRIVYDGTALSGLADVEAAPLLGPDGKPLRSRKWYDSE
EEEECCCCCEEEEEECCCEEEEEEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SLAFDGGTAYVGFERVNQIVKFDFGRDGIRARGQPIAVPPALRKLPNNKGIESLVMVPKP
CEEECCCEEEEEHHHHHHHEEECCCCCCCCCCCCCEECCHHHHHCCCCCCCCEEEECCCC
HPLAGTLIALSERGLDAERNTIGFLIGGKSPGQFSVRRTENYDIADAALMHGGELLILER
CCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEECCCCCHHHHHHHCCCEEEEEEE
KFSWFEGVHIRIRRIALSTIVPGATVDGPSIFEADLGNEIDNMEGLDVHIDAGGAIVLTM
CCCCCCCEEEEEEEEEHHHHCCCCCCCCCCEEEHHCCCCCCCCCCCEEEEECCCEEEEEE
VSDDNFSMLQRTLLLQFTLEAD
EECCCHHHHHHEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA