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The map label for this gene is ssuC [C]

Identifier: 192288900

GI number: 192288900

Start: 505663

End: 506487

Strand: Reverse

Name: ssuC [C]

Synonym: Rpal_0469

Alternate gene names: 192288900

Gene position: 506487-505663 (Counterclockwise)

Preceding gene: 192288901

Following gene: 192288899

Centisome position: 8.82

GC content: 65.82

Gene sequence:

>825_bases
ATGAGCGCCCAGCCCACCTCGCGTGACGAAACGTCTCCGTTCGGCGCTCGCGCCGGGCTGCGCGTCGCGCTGCCGATCAT
CGTCCTGCTCGCCGCGATCGTCGCCTGGGACCTGATCGTCAGGCTCAATCAGATCCCGCCTTATGTGCTGCCGGGACCAT
TGCTGGTCGCTTCGACGCTGATGCAGGACTGGCCGGTGCTGTTCGGCTCGCTGCTGACCACGCTGTGGACCACCCTGGAA
GGCTTCGTCGCCGCCGCGGTCGGCGGCATCGCGCTGGCGCTGCTGTTCAACCAGTCGCGGCTGCTCGAATATTCGCTGTT
CCCCTATGCGGTGGTGCTGCAGGTGACACCGGTGATCGCGATCGCGCCGCTGCTCTTGATCTACCTGCCGCAGGAAACCG
CGGTGATCGTCTGCGCCTGGATCGTCGCGTTCTTTCCGGTGCTGTCCAACACCACGCTGGGGCTCAACTCGGTCGACCGC
AATCTCGCCGGGCTGTTCCGGCTTTATGGCGCCTCGCGTTGGCAGACGCTGCTCCGGCTGAAGCTGCCGGCCGCGCTGCC
TTACATCCTCGGCGGCTTGCGCATCGCCGGCGGACTGTCGCTGATCGGCGCCGTGGTGGCGGAGATCGCTGCGGGCTCGG
CCGGCGCCGGCTCCGGCCTCGCCTACCGGATTGCCGAATCCGGATACCGGCTCAACATTCCGCGCATGTTCGCAGCATTG
CTGTTGCTGTCGACGGCGGGCATTGTGATCTATCTGCTACTGGCGCTGATTTCGCATCTGCTGCTGCGGCGCTGGCACGA
AAGCGCGTTGGGAAAGGATAATTGA

Upstream 100 bases:

>100_bases
AGTTCCGCCTCTCGGCCGATTATGCGGCGCAGTGCCGCGAGGTTTCGCGCGCGCTGGCGTCGGCCAGCGAAGGCGCCCTC
TCCACCCGCGAGGCGCGAGC

Downstream 100 bases:

>100_bases
TGCCGGGGGAAACGGGCGCGTCGAAGCCGATCGATCTCTTGATCTATGGCCCGCGCAAGGAGGTTATCGATCAGGGTTTC
CCGGCCGGCTATGTGCTGCA

Product: ABC transporter inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSAQPTSRDETSPFGARAGLRVALPIIVLLAAIVAWDLIVRLNQIPPYVLPGPLLVASTLMQDWPVLFGSLLTTLWTTLE
GFVAAAVGGIALALLFNQSRLLEYSLFPYAVVLQVTPVIAIAPLLLIYLPQETAVIVCAWIVAFFPVLSNTTLGLNSVDR
NLAGLFRLYGASRWQTLLRLKLPAALPYILGGLRIAGGLSLIGAVVAEIAAGSAGAGSGLAYRIAESGYRLNIPRMFAAL
LLLSTAGIVIYLLLALISHLLLRRWHESALGKDN

Sequences:

>Translated_274_residues
MSAQPTSRDETSPFGARAGLRVALPIIVLLAAIVAWDLIVRLNQIPPYVLPGPLLVASTLMQDWPVLFGSLLTTLWTTLE
GFVAAAVGGIALALLFNQSRLLEYSLFPYAVVLQVTPVIAIAPLLLIYLPQETAVIVCAWIVAFFPVLSNTTLGLNSVDR
NLAGLFRLYGASRWQTLLRLKLPAALPYILGGLRIAGGLSLIGAVVAEIAAGSAGAGSGLAYRIAESGYRLNIPRMFAAL
LLLSTAGIVIYLLLALISHLLLRRWHESALGKDN
>Mature_273_residues
SAQPTSRDETSPFGARAGLRVALPIIVLLAAIVAWDLIVRLNQIPPYVLPGPLLVASTLMQDWPVLFGSLLTTLWTTLEG
FVAAAVGGIALALLFNQSRLLEYSLFPYAVVLQVTPVIAIAPLLLIYLPQETAVIVCAWIVAFFPVLSNTTLGLNSVDRN
LAGLFRLYGASRWQTLLRLKLPAALPYILGGLRIAGGLSLIGAVVAEIAAGSAGAGSGLAYRIAESGYRLNIPRMFAALL
LLSTAGIVIYLLLALISHLLLRRWHESALGKDN

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29276; Mature: 29145

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SAQPTSRDETSPFGARAGLRVALPIIVLLAAIVAWDLIVRLNQIPPYVLPGPLLVASTL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
MQDWPVLFGSLLTTLWTTLEGFVAAAVGGIALALLFNQSRLLEYSLFPYAVVLQVTPVIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAPLLLIYLPQETAVIVCAWIVAFFPVLSNTTLGLNSVDRNLAGLFRLYGASRWQTLLRL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KLPAALPYILGGLRIAGGLSLIGAVVAEIAAGSAGAGSGLAYRIAESGYRLNIPRMFAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEECHHHHHHHH
LLLSTAGIVIYLLLALISHLLLRRWHESALGKDN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]