| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192288898
Identifier: 192288898
GI number: 192288898
Start: 503991
End: 504674
Strand: Reverse
Name: 192288898
Synonym: Rpal_0467
Alternate gene names: NA
Gene position: 504674-503991 (Counterclockwise)
Preceding gene: 192288899
Following gene: 192288897
Centisome position: 8.79
GC content: 64.77
Gene sequence:
>684_bases ATGTGGCGCGCGTTCGGCACGGTGATCCTCTCGGCGCTGCTCGCGTCCGCTGCCGCGGCACAGGACGCAGCTTCGATGAA GAAGGACATGGTCGGCCAGTGGGAGCTGGCGACCACCGAACGCAGCAAGACCTGCGTCGTGACGCTGACGTCCGAGCCCG CCGCCAAGGGCCTGAAACTGACGCTGGAGCCAGACTGCGCCAAGACGCTGCCGTTCACCAAGGCGATCGTCGCCTGGGAC GTGAAGGGTCTCGACATCGTCAGGCTGGAGACCGCCGACGGCGACTCGGTGATCGACTTCACCGAGGTCGAGAGCGGGAT CTTCGAAGGCCATCGCGACGGCGAAGGGATCTACATCCTGCAGAATCTGGTCGCAGCCCGGTCACTCGCCAAATCGATGG AGCAGATGATCGGCGACTGGACGATGGTGCGCGGTAACGGCCGCCAGGTCTGCGGCCTGACGCTGACCAACACCGAAGCG GGCAACGATAATTTCCAGGCGTTCCTGAAGCCGCGCTGCGATGCGCAGATCGCCGGCTTCGGCCCGACGATGTGGCGGCT CGAGCATGGTGCGATGCTGCTGGTCGCGCCGAACGGAGATACTTGGCGGTTCGAGGCCGACGACAATGCGCAGTGGCGCA AGATGCCCGATACCGCTGACCCGCTGATCATGCTGCGGCAATAA
Upstream 100 bases:
>100_bases ACGCGATGAACCAGCTCGTGGTCGACAATCTGAAAGCCTGGTTCTCCGGCCGTCCGCCGCTGACGCCGGTGGCCGAAACT CCGGTGAAAGGCCGCTGACC
Downstream 100 bases:
>100_bases CCCCGTAAAATTACCAGTCTTTCGTCCGGAATCGACAGGCGAGCTACCGGCCGTTTGACCTGCGTCATAGCTCAGTCCGC GCCCCACTCAGCATCCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MWRAFGTVILSALLASAAAAQDAASMKKDMVGQWELATTERSKTCVVTLTSEPAAKGLKLTLEPDCAKTLPFTKAIVAWD VKGLDIVRLETADGDSVIDFTEVESGIFEGHRDGEGIYILQNLVAARSLAKSMEQMIGDWTMVRGNGRQVCGLTLTNTEA GNDNFQAFLKPRCDAQIAGFGPTMWRLEHGAMLLVAPNGDTWRFEADDNAQWRKMPDTADPLIMLRQ
Sequences:
>Translated_227_residues MWRAFGTVILSALLASAAAAQDAASMKKDMVGQWELATTERSKTCVVTLTSEPAAKGLKLTLEPDCAKTLPFTKAIVAWD VKGLDIVRLETADGDSVIDFTEVESGIFEGHRDGEGIYILQNLVAARSLAKSMEQMIGDWTMVRGNGRQVCGLTLTNTEA GNDNFQAFLKPRCDAQIAGFGPTMWRLEHGAMLLVAPNGDTWRFEADDNAQWRKMPDTADPLIMLRQ >Mature_227_residues MWRAFGTVILSALLASAAAAQDAASMKKDMVGQWELATTERSKTCVVTLTSEPAAKGLKLTLEPDCAKTLPFTKAIVAWD VKGLDIVRLETADGDSVIDFTEVESGIFEGHRDGEGIYILQNLVAARSLAKSMEQMIGDWTMVRGNGRQVCGLTLTNTEA GNDNFQAFLKPRCDAQIAGFGPTMWRLEHGAMLLVAPNGDTWRFEADDNAQWRKMPDTADPLIMLRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24840; Mature: 24840
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWRAFGTVILSALLASAAAAQDAASMKKDMVGQWELATTERSKTCVVTLTSEPAAKGLKL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCCCEEE TLEPDCAKTLPFTKAIVAWDVKGLDIVRLETADGDSVIDFTEVESGIFEGHRDGEGIYIL EECCCCCCCCCCHHEEEEEECCCCEEEEEEECCCCCEEEHHHHHHHHHCCCCCCCCEEHH QNLVAARSLAKSMEQMIGDWTMVRGNGRQVCGLTLTNTEAGNDNFQAFLKPRCDAQIAGF HHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEEEECCCCCCCCCEEEECCCCCEEEECC GPTMWRLEHGAMLLVAPNGDTWRFEADDNAQWRKMPDTADPLIMLRQ CCCCEEEECCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure MWRAFGTVILSALLASAAAAQDAASMKKDMVGQWELATTERSKTCVVTLTSEPAAKGLKL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCCCEEE TLEPDCAKTLPFTKAIVAWDVKGLDIVRLETADGDSVIDFTEVESGIFEGHRDGEGIYIL EECCCCCCCCCCHHEEEEEECCCCEEEEEEECCCCCEEEHHHHHHHHHCCCCCCCCEEHH QNLVAARSLAKSMEQMIGDWTMVRGNGRQVCGLTLTNTEAGNDNFQAFLKPRCDAQIAGF HHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEEEECCCCCCCCCEEEECCCCCEEEECC GPTMWRLEHGAMLLVAPNGDTWRFEADDNAQWRKMPDTADPLIMLRQ CCCCEEEECCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA