Click here to switch to the map view.

The map label for this gene is yfeW [C]

Identifier: 192288894

GI number: 192288894

Start: 498951

End: 500138

Strand: Reverse

Name: yfeW [C]

Synonym: Rpal_0463

Alternate gene names: 192288894

Gene position: 500138-498951 (Counterclockwise)

Preceding gene: 192288897

Following gene: 192288893

Centisome position: 8.71

GC content: 63.64

Gene sequence:

>1188_bases
ATGCAGAGCAGCAACCAGATCGATCAAAGCTTGCGACAGATGAGCGAGCGCGGGGATATCCCCGGCGTGGTGGCGATCGC
CGGCAATTCGAAGGAGGTCCTGTATCAGGGCGCGTTCGGCAAGCGCGATCTGTCGAAACCCGAGCAGATGACCACCGACA
GCGTGTTCTGGATCGCGTCGATGACCAAGGCGATCACGGCTGCGGCAGCAATGCAGCTCGTCGAGCAAGGCAAGCTGTCG
CTCGACGAGCCGATTGGCAAGGTGCTGCCCGATCTCGCCGAACCGCTGGTGCTCGACGGATTCGACGCCGACGGTACGCC
GAAGACCCGGCCGGCCAAATCTCCGATCACGCTGCGGCAATTGCTCACCCACACCGCCGGCTTCTGCTACGACATGTGGA
ACGCCGACATGGTGAAGTACATGGAGCGGCACGGCATCCCCGGCATCATCGGCTGCCAGGAAGCCGCGCTGAAGACGCCG
CTTGCGTCCGATCCGGGCACGCGCTGGGAGTACGGCATCAACATCGACTTCGCCGGCAAGGCGGTCGAAGCGGCCAGCGG
CATGAAGCTGGACGCGTATTTGCGCGATCATCTGTTCGCGCCGCTCGGCATGACCGACATGGGCTTCAAGATCAAAGATG
AACAGCGGAAGCGGCTGGTCGCGGTGCATGCCCGCGGCGAGGACGGGTCGCTGTCGCCGATCCCGTTCGAGGTCGCGCAG
GAACCGGAATTCCACATGGGTGGCGGTGGCCTGTACGGCACCGCGGCGGACTATCTGAAGTTCACCCAGATGATCCTCAA
CAAGGGCCGCGGCAACGGCAACCAGGTGCTGAAGCCCGAGACCGTGGCGATGATGGGCCAGAACCACATCGGTGATCTCA
ACGTCACCAAGTTGAATTCGGCGATCGCCTTCGCCACCAACGACGTCGACCTCTATCCCGGCATGACCAAGAAGTGGGGC
CTCAGCTTCCTGATCAACACCGAGAAGACGCCGGAAGGCCGCAGCGCCGGCAGCCTCGCCTGGGCCGGGCTCGCCAATAC
CTATTACTGGATCGATCCGACCCGTGACGTCTGTGGCGTGATCCTGATGCAGGTGCTGCCGTTCGCCGACGCCAAGTGCT
TGGAGGCGTTCGCTGCGTTCGAGCGCGGCGTTTATGCCGCTCTCGGCGCCGGACAGCAGGCAGCCTGA

Upstream 100 bases:

>100_bases
GACTTTGTCGCTCGACCTCGTTATCGCTTGCGGAGCGGAACCGCTCGGTGAAAAATCCGGCCGCTTTTAGAAACTGCCAG
CCAAACAAGGGAGGACGAAC

Downstream 100 bases:

>100_bases
GTTCTCGCGCCGTCGGCGGGGTCGCAATGCCCCGCCGGCGGCGCTATGCTTCGTGAAAGAGGCGACAAGCCCACACGATG
ACGACCCGGCACTCCAAGAA

Product: beta-lactamase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MQSSNQIDQSLRQMSERGDIPGVVAIAGNSKEVLYQGAFGKRDLSKPEQMTTDSVFWIASMTKAITAAAAMQLVEQGKLS
LDEPIGKVLPDLAEPLVLDGFDADGTPKTRPAKSPITLRQLLTHTAGFCYDMWNADMVKYMERHGIPGIIGCQEAALKTP
LASDPGTRWEYGINIDFAGKAVEAASGMKLDAYLRDHLFAPLGMTDMGFKIKDEQRKRLVAVHARGEDGSLSPIPFEVAQ
EPEFHMGGGGLYGTAADYLKFTQMILNKGRGNGNQVLKPETVAMMGQNHIGDLNVTKLNSAIAFATNDVDLYPGMTKKWG
LSFLINTEKTPEGRSAGSLAWAGLANTYYWIDPTRDVCGVILMQVLPFADAKCLEAFAAFERGVYAALGAGQQAA

Sequences:

>Translated_395_residues
MQSSNQIDQSLRQMSERGDIPGVVAIAGNSKEVLYQGAFGKRDLSKPEQMTTDSVFWIASMTKAITAAAAMQLVEQGKLS
LDEPIGKVLPDLAEPLVLDGFDADGTPKTRPAKSPITLRQLLTHTAGFCYDMWNADMVKYMERHGIPGIIGCQEAALKTP
LASDPGTRWEYGINIDFAGKAVEAASGMKLDAYLRDHLFAPLGMTDMGFKIKDEQRKRLVAVHARGEDGSLSPIPFEVAQ
EPEFHMGGGGLYGTAADYLKFTQMILNKGRGNGNQVLKPETVAMMGQNHIGDLNVTKLNSAIAFATNDVDLYPGMTKKWG
LSFLINTEKTPEGRSAGSLAWAGLANTYYWIDPTRDVCGVILMQVLPFADAKCLEAFAAFERGVYAALGAGQQAA
>Mature_395_residues
MQSSNQIDQSLRQMSERGDIPGVVAIAGNSKEVLYQGAFGKRDLSKPEQMTTDSVFWIASMTKAITAAAAMQLVEQGKLS
LDEPIGKVLPDLAEPLVLDGFDADGTPKTRPAKSPITLRQLLTHTAGFCYDMWNADMVKYMERHGIPGIIGCQEAALKTP
LASDPGTRWEYGINIDFAGKAVEAASGMKLDAYLRDHLFAPLGMTDMGFKIKDEQRKRLVAVHARGEDGSLSPIPFEVAQ
EPEFHMGGGGLYGTAADYLKFTQMILNKGRGNGNQVLKPETVAMMGQNHIGDLNVTKLNSAIAFATNDVDLYPGMTKKWG
LSFLINTEKTPEGRSAGSLAWAGLANTYYWIDPTRDVCGVILMQVLPFADAKCLEAFAAFERGVYAALGAGQQAA

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082101, Length=313, Percent_Identity=27.7955271565495, Blast_Score=80, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI115533026, Length=282, Percent_Identity=28.7234042553192, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17550934, Length=193, Percent_Identity=27.4611398963731, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 42749; Mature: 42749

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSSNQIDQSLRQMSERGDIPGVVAIAGNSKEVLYQGAFGKRDLSKPEQMTTDSVFWIAS
CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCHHHCCCHHHHHHH
MTKAITAAAAMQLVEQGKLSLDEPIGKVLPDLAEPLVLDGFDADGTPKTRPAKSPITLRQ
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCHHHHH
LLTHTAGFCYDMWNADMVKYMERHGIPGIIGCQEAALKTPLASDPGTRWEYGINIDFAGK
HHHHHHHHHHHHCCHHHHHHHHHCCCCCEECCCHHHHCCCCCCCCCCCEEEEEEEEECCC
AVEAASGMKLDAYLRDHLFAPLGMTDMGFKIKDEQRKRLVAVHARGEDGSLSPIPFEVAQ
HHHHHCCCCHHHHHHHHHCCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCCCHHHCC
EPEFHMGGGGLYGTAADYLKFTQMILNKGRGNGNQVLKPETVAMMGQNHIGDLNVTKLNS
CCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEECC
AIAFATNDVDLYPGMTKKWGLSFLINTEKTPEGRSAGSLAWAGLANTYYWIDPTRDVCGV
EEEEEECCCEECCCCCHHCCCEEEEECCCCCCCCCCCCEEEHHHCCEEEEECCCHHHHHH
ILMQVLPFADAKCLEAFAAFERGVYAALGAGQQAA
HHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCCC
>Mature Secondary Structure
MQSSNQIDQSLRQMSERGDIPGVVAIAGNSKEVLYQGAFGKRDLSKPEQMTTDSVFWIAS
CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCHHHCCCHHHHHHH
MTKAITAAAAMQLVEQGKLSLDEPIGKVLPDLAEPLVLDGFDADGTPKTRPAKSPITLRQ
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCHHHHH
LLTHTAGFCYDMWNADMVKYMERHGIPGIIGCQEAALKTPLASDPGTRWEYGINIDFAGK
HHHHHHHHHHHHCCHHHHHHHHHCCCCCEECCCHHHHCCCCCCCCCCCEEEEEEEEECCC
AVEAASGMKLDAYLRDHLFAPLGMTDMGFKIKDEQRKRLVAVHARGEDGSLSPIPFEVAQ
HHHHHCCCCHHHHHHHHHCCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCCCHHHCC
EPEFHMGGGGLYGTAADYLKFTQMILNKGRGNGNQVLKPETVAMMGQNHIGDLNVTKLNS
CCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEECC
AIAFATNDVDLYPGMTKKWGLSFLINTEKTPEGRSAGSLAWAGLANTYYWIDPTRDVCGV
EEEEEECCCEECCCCCHHCCCEEEEECCCCCCCCCCCCEEEHHHCCEEEEECCCHHHHHH
ILMQVLPFADAKCLEAFAAFERGVYAALGAGQQAA
HHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]