| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192288752
Identifier: 192288752
GI number: 192288752
Start: 342157
End: 342381
Strand: Reverse
Name: 192288752
Synonym: Rpal_0321
Alternate gene names: NA
Gene position: 342381-342157 (Counterclockwise)
Preceding gene: 192288753
Following gene: 192288751
Centisome position: 5.96
GC content: 64.0
Gene sequence:
>225_bases ATGAATGCCTCGTCCAAGCCCCGCGGCGCCCGGCCGATCACGCTGAACCCGCCGTTGAAACAGCATGCGGTCTGCATCGA TGCGCTGGCCTCGACCATCAACCGCGCCATCGAGCAGGCCGAAGAGCTCGGCATCTCGTCGGCAGTCCAACTGCTGATGA TGGCGCGGCTCGAGGTCGACCTGACGGAAATCGCGCTGGAGAGCCGCACCAAAAACAGTGCCTGA
Upstream 100 bases:
>100_bases TCGGCATCTGCAATCGCCGCTCGGTGCCCGGACCCACGCTGGAATGGCGCGGGCTCGAAGCCATCCGCCGTCATTCGCTT CCGGAATTCCAGGTGATTTC
Downstream 100 bases:
>100_bases CATCGCACCGGCGGGCGAATGCCCGCCGGTTTGTTCACTTAATGTTCTTGCGCAGGGACTGCGCGGCGGTTAGCCTCGTT GCTCTGCGGAGACGGCGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 74; Mature: 74
Protein sequence:
>74_residues MNASSKPRGARPITLNPPLKQHAVCIDALASTINRAIEQAEELGISSAVQLLMMARLEVDLTEIALESRTKNSA
Sequences:
>Translated_74_residues MNASSKPRGARPITLNPPLKQHAVCIDALASTINRAIEQAEELGISSAVQLLMMARLEVDLTEIALESRTKNSA >Mature_74_residues MNASSKPRGARPITLNPPLKQHAVCIDALASTINRAIEQAEELGISSAVQLLMMARLEVDLTEIALESRTKNSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7956; Mature: 7956
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNASSKPRGARPITLNPPLKQHAVCIDALASTINRAIEQAEELGISSAVQLLMMARLEVD CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LTEIALESRTKNSA HHHHHHHHHCCCCC >Mature Secondary Structure MNASSKPRGARPITLNPPLKQHAVCIDALASTINRAIEQAEELGISSAVQLLMMARLEVD CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LTEIALESRTKNSA HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA