| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192288658
Identifier: 192288658
GI number: 192288658
Start: 246494
End: 246895
Strand: Reverse
Name: 192288658
Synonym: Rpal_0227
Alternate gene names: NA
Gene position: 246895-246494 (Counterclockwise)
Preceding gene: 192288659
Following gene: 192288656
Centisome position: 4.3
GC content: 67.91
Gene sequence:
>402_bases ATGCGCCTGCCGATGGGGACCCCGATGTTCGTGAAATCCACTGCCGCCAGACTGTTGCCGGTCCTGCTCGCGGCAGCCGC CGTCGCCGTGATCGGCGTCAGCAATGCCGATGCCGCGCCGAAGAAGAAGCGGGTTTACGGCACCTCCGACCAGATCCGCT ACGGCTCCCGCGGCCCGAACGTGGTCTATCAGGCCGGTCCCCGCACCCGAGTGTACGTTACCAAGCGGTCGTGGCTCGAT GCCGGCACCGAAGTGCAGCCGGGCGAACGCCACTTCTCGGACTACGCCTTCCCGCCGGGCTATTCGTTCGCCCGCGAGAA CGGCCAGCGCCCGCTCGACCGTTGGCCGCTCAATCCGGCCTCCGATCTCGGCGGCTCTCCGACCGGTTTCCCGCTGTACT GA
Upstream 100 bases:
>100_bases CAACATTTTGGCGACGGGCGGATTGAATGATTGTCGGCTGGTGTTGCCGGATTGATCTTGTGGCCGGTGTGCGGCGGCGG CTACAAAGGACGAACCTGGA
Downstream 100 bases:
>100_bases TCCGTTGCGGCACCCGTAGCGACAGCCTCAGAAACGAAAACGCCCGCCGATCCGGCGGGCGTTTTTGTTTGGGTTCAAGG TCCCCGCCGGGCTGGGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MRLPMGTPMFVKSTAARLLPVLLAAAAVAVIGVSNADAAPKKKRVYGTSDQIRYGSRGPNVVYQAGPRTRVYVTKRSWLD AGTEVQPGERHFSDYAFPPGYSFARENGQRPLDRWPLNPASDLGGSPTGFPLY
Sequences:
>Translated_133_residues MRLPMGTPMFVKSTAARLLPVLLAAAAVAVIGVSNADAAPKKKRVYGTSDQIRYGSRGPNVVYQAGPRTRVYVTKRSWLD AGTEVQPGERHFSDYAFPPGYSFARENGQRPLDRWPLNPASDLGGSPTGFPLY >Mature_133_residues MRLPMGTPMFVKSTAARLLPVLLAAAAVAVIGVSNADAAPKKKRVYGTSDQIRYGSRGPNVVYQAGPRTRVYVTKRSWLD AGTEVQPGERHFSDYAFPPGYSFARENGQRPLDRWPLNPASDLGGSPTGFPLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14469; Mature: 14469
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLPMGTPMFVKSTAARLLPVLLAAAAVAVIGVSNADAAPKKKRVYGTSDQIRYGSRGPN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCEEECCCCCC VVYQAGPRTRVYVTKRSWLDAGTEVQPGERHFSDYAFPPGYSFARENGQRPLDRWPLNPA EEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHCCCCCH SDLGGSPTGFPLY HHCCCCCCCCCCC >Mature Secondary Structure MRLPMGTPMFVKSTAARLLPVLLAAAAVAVIGVSNADAAPKKKRVYGTSDQIRYGSRGPN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCEEECCCCCC VVYQAGPRTRVYVTKRSWLDAGTEVQPGERHFSDYAFPPGYSFARENGQRPLDRWPLNPA EEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHCCCCCH SDLGGSPTGFPLY HHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA