| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192288645
Identifier: 192288645
GI number: 192288645
Start: 233035
End: 233523
Strand: Reverse
Name: 192288645
Synonym: Rpal_0214
Alternate gene names: NA
Gene position: 233523-233035 (Counterclockwise)
Preceding gene: 192288646
Following gene: 192288644
Centisome position: 4.07
GC content: 63.6
Gene sequence:
>489_bases ATGGCGGCGACGATGAACGAGGGCAACGCACAGCACGCCTGGGATCTGATGAAGAAGATCACCTTCGCGATGTTGGCGAC GCGCGACGGCGAAAAGATCCGGTCGCGCCCGATGGCCGCCTATGTGAGGCCCGAAGAGGGCGCGATCTACTTCCTCACCG ATGTGCGCCGCCACAAGGACGAGGAGATCGCTCAGGATCACCACGTCAATCTCGGCTTCGCCAATGCCAGCGCGCAGAAG TACGTCTCGGTCACCGGCTATGCGGCGATCAGCGACGACCGCGCCAAGATCAAGGAGCTGTTCGGCACTGAGGCCAAGGC GTGGTGGGACAGCCCGGATGACCCGAATATCCGAGTGCTGAAGGTGACGCCGGAGGAGGCCGAGTATTGGGATTCGCCCG GCAGTCTCATCAGCTACGCCAAGATGATGGTGGCCGCCGCCACCGGGAGCCGGCCCGACCTCGGCGAGAACGCCAAGGTG GCGATCTAA
Upstream 100 bases:
>100_bases CTGCGCTCCCCGCAATGACTGTGCAGCCTCATTGCCTGGCTCTCGCGGAACATCGCTGCAGAGCGATCGTTATCGCCGCT GACGAACAAGGGAGAGCGAG
Downstream 100 bases:
>100_bases TGGCCCCCGGCGATCCGCAGGAAGTCCCGAACGATCCTGGACCTGTCACTCCTCCGCCGGAGGTGCCCCCGAGTACGCCC GGCACGCCGACCGAGCCGCC
Product: pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Products: NA
Alternate protein names: Stress Protein; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Pyridoxamine 5-Phosphate Oxidase-Related Protein; General Stress
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MAATMNEGNAQHAWDLMKKITFAMLATRDGEKIRSRPMAAYVRPEEGAIYFLTDVRRHKDEEIAQDHHVNLGFANASAQK YVSVTGYAAISDDRAKIKELFGTEAKAWWDSPDDPNIRVLKVTPEEAEYWDSPGSLISYAKMMVAAATGSRPDLGENAKV AI
Sequences:
>Translated_162_residues MAATMNEGNAQHAWDLMKKITFAMLATRDGEKIRSRPMAAYVRPEEGAIYFLTDVRRHKDEEIAQDHHVNLGFANASAQK YVSVTGYAAISDDRAKIKELFGTEAKAWWDSPDDPNIRVLKVTPEEAEYWDSPGSLISYAKMMVAAATGSRPDLGENAKV AI >Mature_161_residues AATMNEGNAQHAWDLMKKITFAMLATRDGEKIRSRPMAAYVRPEEGAIYFLTDVRRHKDEEIAQDHHVNLGFANASAQKY VSVTGYAAISDDRAKIKELFGTEAKAWWDSPDDPNIRVLKVTPEEAEYWDSPGSLISYAKMMVAAATGSRPDLGENAKVA I
Specific function: Unknown
COG id: COG3871
COG function: function code R; Uncharacterized stress protein (general stress protein 26)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17991; Mature: 17860
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: PS00595 AA_TRANSFER_CLASS_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATMNEGNAQHAWDLMKKITFAMLATRDGEKIRSRPMAAYVRPEEGAIYFLTDVRRHKD CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCCEEEEECCHHCCH EEIAQDHHVNLGFANASAQKYVSVTGYAAISDDRAKIKELFGTEAKAWWDSPDDPNIRVL HHHHHHCCCEEEECCCCCCEEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCEEEE KVTPEEAEYWDSPGSLISYAKMMVAAATGSRPDLGENAKVAI EECCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEC >Mature Secondary Structure AATMNEGNAQHAWDLMKKITFAMLATRDGEKIRSRPMAAYVRPEEGAIYFLTDVRRHKD CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCCEEEEECCHHCCH EEIAQDHHVNLGFANASAQKYVSVTGYAAISDDRAKIKELFGTEAKAWWDSPDDPNIRVL HHHHHHCCCEEEECCCCCCEEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCEEEE KVTPEEAEYWDSPGSLISYAKMMVAAATGSRPDLGENAKVAI EECCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA