| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is tesA [H]
Identifier: 192288623
GI number: 192288623
Start: 208301
End: 208915
Strand: Reverse
Name: tesA [H]
Synonym: Rpal_0190
Alternate gene names: 192288623
Gene position: 208915-208301 (Counterclockwise)
Preceding gene: 192288628
Following gene: 192288622
Centisome position: 3.64
GC content: 67.15
Gene sequence:
>615_bases ATGGCGGCGCTGCCTGGACAAACCGCGCGGGCCGAGACGGCCGCCAAGCCGCTGAAGCTGGTGGTGCTCGGGGACTCGCT GACCGCCGGCTACGGCCTGCCGGCCGCCGATGCGTTTCCGGCCAAGCTGCAAAAGGCACTCAAGGCCAAAGGCATCGACA CCGAGATGGTGAACGCTGGCGTATCCGGTGATACCGCCAGCGGCGGCCTGCAGCGGCTCGACTGGTCGGTCCCCCCTGAT GCGGACGCGGTCATCGTCGAGCTCGGCGCCAACGATGCGCTGCGCGGCACCGATCCGAAGGTCCCGCGCAAGGCGCTGGA CGAGATCTTGAAGCGGTTGAAGGCGCGCAATCTGCCGGTGCTGCTCGCCGGCATGCTGGCGCCGCCGAATTACGGCAAAG ACTACGCCGCGCAGTTCGACGCGATCTATCCGGACCTTGCCAAGCAGTACGACGTGCCGCTGTATCCGTTCTTCCTCGAC GGCGTCGCGGCGGTGTCGAATCTCAATCAGGCCGACGGCATCCATCCGACCGCGGCCGGCGTCGACATCATCGTCGAGCG GATTTTGCCCAAGGTTGAGGCGCTGCTTCGCCCGCTCCTGGTGCAGAGCCGCTGA
Upstream 100 bases:
>100_bases GGGTTCAATGAGACTGTCCATGGCTGCCTCATATGGCTATTCAATCGTGGCGGTCGAGGGGTGGGCGCGCACGATCGCGC TGGTCCTGGGACTTGGAATA
Downstream 100 bases:
>100_bases GAAAACGGCAATCCGGGCTTAAGGGTAGGATTGCCCTCAGCTTTTTCGGCTCTGCGCGGGCTCCACTGTAGCGCTGTTAC ACAAACGCGCTACACAATCG
Product: G-D-S-L family lipolytic protein
Products: NA
Alternate protein names: Lecithinase B; Lysophospholipase L1; Protease I [H]
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MAALPGQTARAETAAKPLKLVVLGDSLTAGYGLPAADAFPAKLQKALKAKGIDTEMVNAGVSGDTASGGLQRLDWSVPPD ADAVIVELGANDALRGTDPKVPRKALDEILKRLKARNLPVLLAGMLAPPNYGKDYAAQFDAIYPDLAKQYDVPLYPFFLD GVAAVSNLNQADGIHPTAAGVDIIVERILPKVEALLRPLLVQSR
Sequences:
>Translated_204_residues MAALPGQTARAETAAKPLKLVVLGDSLTAGYGLPAADAFPAKLQKALKAKGIDTEMVNAGVSGDTASGGLQRLDWSVPPD ADAVIVELGANDALRGTDPKVPRKALDEILKRLKARNLPVLLAGMLAPPNYGKDYAAQFDAIYPDLAKQYDVPLYPFFLD GVAAVSNLNQADGIHPTAAGVDIIVERILPKVEALLRPLLVQSR >Mature_203_residues AALPGQTARAETAAKPLKLVVLGDSLTAGYGLPAADAFPAKLQKALKAKGIDTEMVNAGVSGDTASGGLQRLDWSVPPDA DAVIVELGANDALRGTDPKVPRKALDEILKRLKARNLPVLLAGMLAPPNYGKDYAAQFDAIYPDLAKQYDVPLYPFFLDG VAAVSNLNQADGIHPTAAGVDIIVERILPKVEALLRPLLVQSR
Specific function: Hydrolyzes only long chain acyl thioesters (C12-C18). Specificity similar to chymotrypsin [H]
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDSL' lipolytic enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1786702, Length=178, Percent_Identity=42.1348314606742, Blast_Score=130, Evalue=5e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013830 - InterPro: IPR013831 - InterPro: IPR001087 - InterPro: IPR008265 [H]
Pfam domain/function: PF00657 Lipase_GDSL [H]
EC number: =3.1.1.5 [H]
Molecular weight: Translated: 21487; Mature: 21356
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS01098 LIPASE_GDSL_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALPGQTARAETAAKPLKLVVLGDSLTAGYGLPAADAFPAKLQKALKAKGIDTEMVNAG CCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCC VSGDTASGGLQRLDWSVPPDADAVIVELGANDALRGTDPKVPRKALDEILKRLKARNLPV CCCCCCCCCHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCE LLAGMLAPPNYGKDYAAQFDAIYPDLAKQYDVPLYPFFLDGVAAVSNLNQADGIHPTAAG EEEHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHCCCCCCHHH VDIIVERILPKVEALLRPLLVQSR HHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AALPGQTARAETAAKPLKLVVLGDSLTAGYGLPAADAFPAKLQKALKAKGIDTEMVNAG CCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCC VSGDTASGGLQRLDWSVPPDADAVIVELGANDALRGTDPKVPRKALDEILKRLKARNLPV CCCCCCCCCHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCE LLAGMLAPPNYGKDYAAQFDAIYPDLAKQYDVPLYPFFLDGVAAVSNLNQADGIHPTAAG EEEHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHCCCCCCHHH VDIIVERILPKVEALLRPLLVQSR HHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]