| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192288583
Identifier: 192288583
GI number: 192288583
Start: 166287
End: 167450
Strand: Reverse
Name: 192288583
Synonym: Rpal_0150
Alternate gene names: NA
Gene position: 167450-166287 (Counterclockwise)
Preceding gene: 192288589
Following gene: 192288582
Centisome position: 2.92
GC content: 64.26
Gene sequence:
>1164_bases ATGGCTGAGGACAGTCTGACCACCACGAACGCCGGCATCGCCGCACACGGCGCCACCCGACTGCCTTCAGTCGAGATCGA CAGCTACAATATCGAGATCAAGGACGAGGACGGCTTCCTCGGCGACCGCGCCTCCAAGGGGGCGTTTCAGCGCCTGCTCG ACGATTGGCGCAAAGCGCTGCGCGAGACCGGCGACGATCCGTTCGGGCGGCGAGACACCAAGAATATCGCCAAGAGCGCG CTCGACGAGGTGCTGACCAGCGACGACGTCGCCGCCGCTGCGGTGGTGCACAGCGCGATCGAGGATTTTGCGCAGGAGCT GGCCTACGTCACCAAGCGCTTCCTGCGCACCAAGGCGTGGGCCGAGACCGAGTGCATCGTGGTCGGCGGCGGCTTCCGCC AGAGCCGGGTGGGCGAGCTGGCGATTGCCCGCACCGACATTCTGCTCAAGGCGGACGGCCACGCGGTCGATCTGGTGCCG ATCCGATTTCACCCCGACGAGGCCGGGCTGATCGGTTGCCTGCATCTGGCGCCGTCGTGGATCTTCGAGGCTCACGACAG CATCCTGGCGGTCGATATCGGCGGCTCCAACATCCGCTGCGGCGTGGTCGAGACCGCCTGGAAGAAGGCGCCCGACCTGT CGAAAGCCTCGGTGTGGAAGTCCGACCTGTGGCGGCACGCCGATGACGAGCCGACCCGCGAAGGTGCGGTGAAGCGGCTG ACCCGGATGCTCAAGGACCTGATCTCGGAGGCCGAGGACGAAGGCTTCAAGCTGGCGCCGTTCATCGGCATCTCCTGCCC CGGCGTCATCAATGCCGATGGCAGCATCGAAAAAGGCGCCCAGAACCTGCCGGGCAATTGGGAGAGCAGCAAGTTCCACC TGCCGCGCAGCCTGCTCGAAGGCATCCCGACGATCGGCAGCCACGACACCGCGATCCTGATGCACAATGACGGCGTGGCC CAGGGCCTCAGCGAAGTGCCGTTCATGCAGGAATTCGAGCGCTGGGGCGTGCTGACGATCGGCACCGGCCTTGGCAATGC TCGTTTCACCAACCGCCGCGACAAGGACAAGGCCAAGAAGGAGCGGGAGAAGGATAAGGAAAAAGACAAAGAGAAAGACA AGGAGAAGGGTAAAAAAGACAAGGACAGCAAGGAGAAGGCCTGA
Upstream 100 bases:
>100_bases AGCCGCAATGCCGCCGCCGGCGGAAGGGGGGCGCCGGACCGGGATGCAACCAACCGGTTCCCGGATCGTTGTCGACCGGA TTTCAACGGGGTGCCCACCG
Downstream 100 bases:
>100_bases GCCCCATGGGCTGCCAGCCCCGCGCGGCCGGCGATCTGGTGCTCTCCGGTCAATTCTGGCGAGAAATCCGCCATACCCCG CCTTGTCTATCTGTCGCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: ATPase AAA-2 Domain-Containing Protein
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MAEDSLTTTNAGIAAHGATRLPSVEIDSYNIEIKDEDGFLGDRASKGAFQRLLDDWRKALRETGDDPFGRRDTKNIAKSA LDEVLTSDDVAAAAVVHSAIEDFAQELAYVTKRFLRTKAWAETECIVVGGGFRQSRVGELAIARTDILLKADGHAVDLVP IRFHPDEAGLIGCLHLAPSWIFEAHDSILAVDIGGSNIRCGVVETAWKKAPDLSKASVWKSDLWRHADDEPTREGAVKRL TRMLKDLISEAEDEGFKLAPFIGISCPGVINADGSIEKGAQNLPGNWESSKFHLPRSLLEGIPTIGSHDTAILMHNDGVA QGLSEVPFMQEFERWGVLTIGTGLGNARFTNRRDKDKAKKEREKDKEKDKEKDKEKGKKDKDSKEKA
Sequences:
>Translated_387_residues MAEDSLTTTNAGIAAHGATRLPSVEIDSYNIEIKDEDGFLGDRASKGAFQRLLDDWRKALRETGDDPFGRRDTKNIAKSA LDEVLTSDDVAAAAVVHSAIEDFAQELAYVTKRFLRTKAWAETECIVVGGGFRQSRVGELAIARTDILLKADGHAVDLVP IRFHPDEAGLIGCLHLAPSWIFEAHDSILAVDIGGSNIRCGVVETAWKKAPDLSKASVWKSDLWRHADDEPTREGAVKRL TRMLKDLISEAEDEGFKLAPFIGISCPGVINADGSIEKGAQNLPGNWESSKFHLPRSLLEGIPTIGSHDTAILMHNDGVA QGLSEVPFMQEFERWGVLTIGTGLGNARFTNRRDKDKAKKEREKDKEKDKEKDKEKGKKDKDSKEKA >Mature_386_residues AEDSLTTTNAGIAAHGATRLPSVEIDSYNIEIKDEDGFLGDRASKGAFQRLLDDWRKALRETGDDPFGRRDTKNIAKSAL DEVLTSDDVAAAAVVHSAIEDFAQELAYVTKRFLRTKAWAETECIVVGGGFRQSRVGELAIARTDILLKADGHAVDLVPI RFHPDEAGLIGCLHLAPSWIFEAHDSILAVDIGGSNIRCGVVETAWKKAPDLSKASVWKSDLWRHADDEPTREGAVKRLT RMLKDLISEAEDEGFKLAPFIGISCPGVINADGSIEKGAQNLPGNWESSKFHLPRSLLEGIPTIGSHDTAILMHNDGVAQ GLSEVPFMQEFERWGVLTIGTGLGNARFTNRRDKDKAKKEREKDKEKDKEKDKEKGKKDKDSKEKA
Specific function: Unknown
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42540; Mature: 42409
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEDSLTTTNAGIAAHGATRLPSVEIDSYNIEIKDEDGFLGDRASKGAFQRLLDDWRKAL CCCCCCCCCCCCEEECCCCCCCCEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH RETGDDPFGRRDTKNIAKSALDEVLTSDDVAAAAVVHSAIEDFAQELAYVTKRFLRTKAW HHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AETECIVVGGGFRQSRVGELAIARTDILLKADGHAVDLVPIRFHPDEAGLIGCLHLAPSW CCCEEEEEECCCCHHHHHHEEEEEEEEEEECCCCEEEEEEEEECCCCCCCEEHHHHHHHH IFEAHDSILAVDIGGSNIRCGVVETAWKKAPDLSKASVWKSDLWRHADDEPTREGAVKRL HHHCCCCEEEEEECCCCEEECHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH TRMLKDLISEAEDEGFKLAPFIGISCPGVINADGSIEKGAQNLPGNWESSKFHLPRSLLE HHHHHHHHHHHHCCCEEEECEECCCCCCEECCCCCHHHCCCCCCCCCCCCCEECCHHHHC GIPTIGSHDTAILMHNDGVAQGLSEVPFMQEFERWGVLTIGTGLGNARFTNRRDKDKAKK CCCCCCCCCCEEEEECCCHHHHHHHCHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHH EREKDKEKDKEKDKEKGKKDKDSKEKA HHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AEDSLTTTNAGIAAHGATRLPSVEIDSYNIEIKDEDGFLGDRASKGAFQRLLDDWRKAL CCCCCCCCCCCEEECCCCCCCCEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH RETGDDPFGRRDTKNIAKSALDEVLTSDDVAAAAVVHSAIEDFAQELAYVTKRFLRTKAW HHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AETECIVVGGGFRQSRVGELAIARTDILLKADGHAVDLVPIRFHPDEAGLIGCLHLAPSW CCCEEEEEECCCCHHHHHHEEEEEEEEEEECCCCEEEEEEEEECCCCCCCEEHHHHHHHH IFEAHDSILAVDIGGSNIRCGVVETAWKKAPDLSKASVWKSDLWRHADDEPTREGAVKRL HHHCCCCEEEEEECCCCEEECHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH TRMLKDLISEAEDEGFKLAPFIGISCPGVINADGSIEKGAQNLPGNWESSKFHLPRSLLE HHHHHHHHHHHHCCCEEEECEECCCCCCEECCCCCHHHCCCCCCCCCCCCCEECCHHHHC GIPTIGSHDTAILMHNDGVAQGLSEVPFMQEFERWGVLTIGTGLGNARFTNRRDKDKAKK CCCCCCCCCCEEEEECCCHHHHHHHCHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHH EREKDKEKDKEKDKEKGKKDKDSKEKA HHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA