| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is ssuC [H]
Identifier: 192288568
GI number: 192288568
Start: 148360
End: 149133
Strand: Reverse
Name: ssuC [H]
Synonym: Rpal_0135
Alternate gene names: 192288568
Gene position: 149133-148360 (Counterclockwise)
Preceding gene: 192288569
Following gene: 192288567
Centisome position: 2.6
GC content: 71.58
Gene sequence:
>774_bases ATGCGGGGTAGCGCGCGGGTCTCGTGGGCCTGGAGCCTGGTCGGCATCGCGCTGCTGCTGGCGCTCTGGGAGGCGGGCCA TCGTGCGTATGGGCCGTTGGTCCTTCCGGGGCTCGGCGATACGGTCCTGACGCTGTGGCGGATGATCCGCGCCGGGCAGG TCGGTCCGGCGCTGCTCGAGACCGCCGGCAATGCTGGGCTCGGCTGGATCATAGGCGTGCTGATCGGCTCGTGTGCCGGG ATGCTCGCCGGCCTGCGCGAAGAAGCGCAGCGCGCATTGCAGCCGGTCGCCATCATCCTGCTCGGCGTGCCGGCGATCGC CTGGGTGGTGTTGGCGCTGCTGTGGTTCGGCGGCCGCTGGGCGGTGGTGGTGACGGTCGCTGCCGCCACCGGGCCGATGC TGTTCGCCGCGGCGCTGGAGGGCGTGCGCAGCCTCGACGGCACGCTGGCCCGGATGGCGCAGGTGTACCAAGTGCCGCTG TCGGCGCGGCTGACTGAGGTGTACGGGCCGCAGCTGCTGAGCCATCTGTTCCCGGCGCTGGTGACGACGCTGGCGATGTC CTGGAAGGTCGCGGTGATGGCCGAGCTGCTCGCTGGCGCCGGTGGGATCGGCGACGGTCTGGCGACCGCACGTGCTCATG TCGACACCGCCGAGACGATGGCCTGGGTAGTGGTCGTGGTCGGCGTGCTGATCGTGGTCGATGTCGGCGTGCTGCAGCCG CTGCAGCGGCGGCTGTGGTTGTGGCGCGACGACGAGCGGGGCGGTGGCCGATGA
Upstream 100 bases:
>100_bases CCGGCGCGGCAGGCGCGTGACGACATCGAAATGTACTTCAAGAATTTGATGGAGCTCGATCCCGGCATCGTCGGCGGCCG GCTGCCGGACGCGGCGTTCT
Downstream 100 bases:
>100_bases GTCAGCCCCTGCTGCAATTCCGCGATGTGCAGTTCGGCTATCAGGCGCCGCTGCTGCACGGCATCAGCTTCGACGTCGCG GCAGGCTCGATCACCGCGGT
Product: ABC transporter inner membrane protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MRGSARVSWAWSLVGIALLLALWEAGHRAYGPLVLPGLGDTVLTLWRMIRAGQVGPALLETAGNAGLGWIIGVLIGSCAG MLAGLREEAQRALQPVAIILLGVPAIAWVVLALLWFGGRWAVVVTVAAATGPMLFAAALEGVRSLDGTLARMAQVYQVPL SARLTEVYGPQLLSHLFPALVTTLAMSWKVAVMAELLAGAGGIGDGLATARAHVDTAETMAWVVVVVGVLIVVDVGVLQP LQRRLWLWRDDERGGGR
Sequences:
>Translated_257_residues MRGSARVSWAWSLVGIALLLALWEAGHRAYGPLVLPGLGDTVLTLWRMIRAGQVGPALLETAGNAGLGWIIGVLIGSCAG MLAGLREEAQRALQPVAIILLGVPAIAWVVLALLWFGGRWAVVVTVAAATGPMLFAAALEGVRSLDGTLARMAQVYQVPL SARLTEVYGPQLLSHLFPALVTTLAMSWKVAVMAELLAGAGGIGDGLATARAHVDTAETMAWVVVVVGVLIVVDVGVLQP LQRRLWLWRDDERGGGR >Mature_257_residues MRGSARVSWAWSLVGIALLLALWEAGHRAYGPLVLPGLGDTVLTLWRMIRAGQVGPALLETAGNAGLGWIIGVLIGSCAG MLAGLREEAQRALQPVAIILLGVPAIAWVVLALLWFGGRWAVVVTVAAATGPMLFAAALEGVRSLDGTLARMAQVYQVPL SARLTEVYGPQLLSHLFPALVTTLAMSWKVAVMAELLAGAGGIGDGLATARAHVDTAETMAWVVVVVGVLIVVDVGVLQP LQRRLWLWRDDERGGGR
Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 27060; Mature: 27060
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGSARVSWAWSLVGIALLLALWEAGHRAYGPLVLPGLGDTVLTLWRMIRAGQVGPALLE CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHCCCCCHHHHH TAGNAGLGWIIGVLIGSCAGMLAGLREEAQRALQPVAIILLGVPAIAWVVLALLWFGGRW HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH AVVVTVAAATGPMLFAAALEGVRSLDGTLARMAQVYQVPLSARLTEVYGPQLLSHLFPAL HHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH VTTLAMSWKVAVMAELLAGAGGIGDGLATARAHVDTAETMAWVVVVVGVLIVVDVGVLQP HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQRRLWLWRDDERGGGR HHHHHCCCCCCCCCCCC >Mature Secondary Structure MRGSARVSWAWSLVGIALLLALWEAGHRAYGPLVLPGLGDTVLTLWRMIRAGQVGPALLE CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHCCCCCHHHHH TAGNAGLGWIIGVLIGSCAGMLAGLREEAQRALQPVAIILLGVPAIAWVVLALLWFGGRW HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH AVVVTVAAATGPMLFAAALEGVRSLDGTLARMAQVYQVPLSARLTEVYGPQLLSHLFPAL HHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH VTTLAMSWKVAVMAELLAGAGGIGDGLATARAHVDTAETMAWVVVVVGVLIVVDVGVLQP HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQRRLWLWRDDERGGGR HHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8011666; 9782504; 9384377 [H]