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The map label for this gene is 192288521

Identifier: 192288521

GI number: 192288521

Start: 97634

End: 98980

Strand: Reverse

Name: 192288521

Synonym: Rpal_0088

Alternate gene names: NA

Gene position: 98980-97634 (Counterclockwise)

Preceding gene: 192288524

Following gene: 192288519

Centisome position: 1.72

GC content: 68.23

Gene sequence:

>1347_bases
ATGAGATCGATGCTGGCTGCAACCCTGATCGTCGCCGGTGCCGCCACCCTGCCGGTGCATGGCGCCCACGCCGCACCGCC
GAAACAGGCCGCCGCTGCGCCTCCGGCGGCGCAGACGCCTGCGGAGACCGCCAAAACGCTGGCGCAGGCGGAGCGCCAGG
CGATCCAGTCGGATCTTGCCTGGACCGGCGATTACAACGGCCTGATCAACGGCGAGGTGTCCGATCGGATGATCGCGGCG
ATCAAGCAGTTCCAGACCAACCAGGGTCACAAGCCGACCGGCGTGCTCAATCCGCAGGAGCGCGGGCAACTCGCCGCGGC
GGCGCGCAAGCTGCAGGCCAGCGTCGGCTGGAAGCTGGTGGCCGATCCGGTCACCGGCGCACGGATCGGCGTGCCGACCA
AACTGGTGCCGCAGCAAGCGTCCGATGCCGGCGGCACCCGCTGGAGTTCCTCCACCGGCACGATCCAGGTCGCGCTGTCG
CGGCGCAAGGAGGCGGACCTCTCGATCGCCAAACTCGCCGAGCAGGAAAAGAAGCAGCCTGGCCGCAAGGTCGAATACAG
CGCGGTCCGGCCCGACTTCTTCGTGCTGTCGGGCACCCAGGGTCAGAAGAAGTTCTACATCCGCGGCAGCTTCAAGAACG
CCGAGGTGCGGATCCTCACCGTGATGTACGATCAGGCCACCGAAGGCACGATGCAGCCGGTCGTGGTGGCGATGTCGAGC
GCCTACGATCCGTTTCCGGGCGGCGTCCAGGCCGGCCCACCGCCGCGCAAGAAGGTCGAATATTCGACCGGCACGATCGT
CGGCGCCGATGGTGCGATCCTGGCCGATCGCGAGGCGGTCGAGGGCTGTCTGTCGATCGTTGTTGCGGGTTACGGTCCTG
CCGATCTGGCCGATCGCAGCAAGGAGCACGAGCTGGCGCTGCTGCGGATCTACGGCGCGTCCGAGCTCAAGCCGCTGCCG
ATCGGCAGCGGTGCTGCCAAGCCAGGAGCGGTCGAGATCACCGGCGTCGCCGATCCGCAGAGCCAGGGCGGCGGCGCTGC
CGTCACCACCGTCAAGGCGCAGCTCACCGCAGCCGTCACCACCGACGGTTTGATAGTAACGCCGCCGCCGAGCCTCGGCT
TTTCCGGTGCGCCGGCCCGAGATGCGGACGGGCGTTTCGCGGGGCTGACGACGCTGCGTCTGCCACTGGTCGCAGGAGCG
GCTGAGAGCGCTGCGCCGCCGCAGGCGACCTTGATCACCGCCGACACCGTCCGCAGCTATCTCACCGGCGTCGGCGTGAA
GCCGGTCGAAGGTACCACCAAGGATCCCAAAGCGAGCGTCGTCCGCGTGATCTGCGTACGGAAGTAA

Upstream 100 bases:

>100_bases
GACATTGTGCGCGGTGCCGCGCGTCGAACCGGCGCAGCGTTGGCGCCGACCAAGCGGTTGTGGTTATTTGCGCATGGCGC
AACGTTGCTCGGGAATTGTC

Downstream 100 bases:

>100_bases
TCCCCGCGGACTCACTGCCTGTGTCGTCCGAAATGATTGATTGAATTCCATTCACTTCTGGCACTTCGGGCACCAGAACG
TCGACCGGCCGTTCTGCACG

Product: peptidoglycan-binding domain 1 protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MRSMLAATLIVAGAATLPVHGAHAAPPKQAAAAPPAAQTPAETAKTLAQAERQAIQSDLAWTGDYNGLINGEVSDRMIAA
IKQFQTNQGHKPTGVLNPQERGQLAAAARKLQASVGWKLVADPVTGARIGVPTKLVPQQASDAGGTRWSSSTGTIQVALS
RRKEADLSIAKLAEQEKKQPGRKVEYSAVRPDFFVLSGTQGQKKFYIRGSFKNAEVRILTVMYDQATEGTMQPVVVAMSS
AYDPFPGGVQAGPPPRKKVEYSTGTIVGADGAILADREAVEGCLSIVVAGYGPADLADRSKEHELALLRIYGASELKPLP
IGSGAAKPGAVEITGVADPQSQGGGAAVTTVKAQLTAAVTTDGLIVTPPPSLGFSGAPARDADGRFAGLTTLRLPLVAGA
AESAAPPQATLITADTVRSYLTGVGVKPVEGTTKDPKASVVRVICVRK

Sequences:

>Translated_448_residues
MRSMLAATLIVAGAATLPVHGAHAAPPKQAAAAPPAAQTPAETAKTLAQAERQAIQSDLAWTGDYNGLINGEVSDRMIAA
IKQFQTNQGHKPTGVLNPQERGQLAAAARKLQASVGWKLVADPVTGARIGVPTKLVPQQASDAGGTRWSSSTGTIQVALS
RRKEADLSIAKLAEQEKKQPGRKVEYSAVRPDFFVLSGTQGQKKFYIRGSFKNAEVRILTVMYDQATEGTMQPVVVAMSS
AYDPFPGGVQAGPPPRKKVEYSTGTIVGADGAILADREAVEGCLSIVVAGYGPADLADRSKEHELALLRIYGASELKPLP
IGSGAAKPGAVEITGVADPQSQGGGAAVTTVKAQLTAAVTTDGLIVTPPPSLGFSGAPARDADGRFAGLTTLRLPLVAGA
AESAAPPQATLITADTVRSYLTGVGVKPVEGTTKDPKASVVRVICVRK
>Mature_448_residues
MRSMLAATLIVAGAATLPVHGAHAAPPKQAAAAPPAAQTPAETAKTLAQAERQAIQSDLAWTGDYNGLINGEVSDRMIAA
IKQFQTNQGHKPTGVLNPQERGQLAAAARKLQASVGWKLVADPVTGARIGVPTKLVPQQASDAGGTRWSSSTGTIQVALS
RRKEADLSIAKLAEQEKKQPGRKVEYSAVRPDFFVLSGTQGQKKFYIRGSFKNAEVRILTVMYDQATEGTMQPVVVAMSS
AYDPFPGGVQAGPPPRKKVEYSTGTIVGADGAILADREAVEGCLSIVVAGYGPADLADRSKEHELALLRIYGASELKPLP
IGSGAAKPGAVEITGVADPQSQGGGAAVTTVKAQLTAAVTTDGLIVTPPPSLGFSGAPARDADGRFAGLTTLRLPLVAGA
AESAAPPQATLITADTVRSYLTGVGVKPVEGTTKDPKASVVRVICVRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46246; Mature: 46246

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSMLAATLIVAGAATLPVHGAHAAPPKQAAAAPPAAQTPAETAKTLAQAERQAIQSDLA
CCHHHHHHHHHHCCHHCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
WTGDYNGLINGEVSDRMIAAIKQFQTNQGHKPTGVLNPQERGQLAAAARKLQASVGWKLV
CCCCCCCEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEE
ADPVTGARIGVPTKLVPQQASDAGGTRWSSSTGTIQVALSRRKEADLSIAKLAEQEKKQP
ECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHCC
GRKVEYSAVRPDFFVLSGTQGQKKFYIRGSFKNAEVRILTVMYDQATEGTMQPVVVAMSS
CCEEEEEEECCCEEEEECCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCHHHEEECC
AYDPFPGGVQAGPPPRKKVEYSTGTIVGADGAILADREAVEGCLSIVVAGYGPADLADRS
CCCCCCCCCCCCCCCCCEEEECCCEEECCCCCEEECHHHHHHHHHHHEECCCCHHHHCCC
KEHELALLRIYGASELKPLPIGSGAAKPGAVEITGVADPQSQGGGAAVTTVKAQLTAAVT
CCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEEEEEE
TDGLIVTPPPSLGFSGAPARDADGRFAGLTTLRLPLVAGAAESAAPPQATLITADTVRSY
CCCEEEECCCCCCCCCCCCCCCCCCEEEHEEEEHHHEECCCCCCCCCCEEEEEHHHHHHH
LTGVGVKPVEGTTKDPKASVVRVICVRK
HHCCCCCCCCCCCCCCHHCEEEEEEECC
>Mature Secondary Structure
MRSMLAATLIVAGAATLPVHGAHAAPPKQAAAAPPAAQTPAETAKTLAQAERQAIQSDLA
CCHHHHHHHHHHCCHHCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
WTGDYNGLINGEVSDRMIAAIKQFQTNQGHKPTGVLNPQERGQLAAAARKLQASVGWKLV
CCCCCCCEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEE
ADPVTGARIGVPTKLVPQQASDAGGTRWSSSTGTIQVALSRRKEADLSIAKLAEQEKKQP
ECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHCC
GRKVEYSAVRPDFFVLSGTQGQKKFYIRGSFKNAEVRILTVMYDQATEGTMQPVVVAMSS
CCEEEEEEECCCEEEEECCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCHHHEEECC
AYDPFPGGVQAGPPPRKKVEYSTGTIVGADGAILADREAVEGCLSIVVAGYGPADLADRS
CCCCCCCCCCCCCCCCCEEEECCCEEECCCCCEEECHHHHHHHHHHHEECCCCHHHHCCC
KEHELALLRIYGASELKPLPIGSGAAKPGAVEITGVADPQSQGGGAAVTTVKAQLTAAVT
CCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEEEEEE
TDGLIVTPPPSLGFSGAPARDADGRFAGLTTLRLPLVAGAAESAAPPQATLITADTVRSY
CCCEEEECCCCCCCCCCCCCCCCCCEEEHEEEEHHHEECCCCCCCCCCEEEEEHHHHHHH
LTGVGVKPVEGTTKDPKASVVRVICVRK
HHCCCCCCCCCCCCCCHHCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA