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The map label for this gene is ykpB [H]

Identifier: 192288454

GI number: 192288454

Start: 22326

End: 23246

Strand: Reverse

Name: ykpB [H]

Synonym: Rpal_0021

Alternate gene names: 192288454

Gene position: 23246-22326 (Counterclockwise)

Preceding gene: 192288455

Following gene: 192288453

Centisome position: 0.4

GC content: 66.45

Gene sequence:

>921_bases
ATGCGGATTCTAATCGTTGGTGCCGGTGCGATCGGCGGCTATTTCGGCGGCCGGCTGTTGCAGCTCGGGCGCGACGTCAC
GTTTCTGGTGCGGCCCGGCCGTGCGGCGGAATTGACGCGCGACGGGTTGGTGATCAAGAGCCCGCACGGCGATGCGACGA
TCCAGAATCCTCCGGCCGTGCAGGCTGCGGCGCTGACGCCCGACTACGATCTGGTGGTGCTCAGTTGCAAGGCGTTCGAT
CTCGACGACGCGATTGCCTCGTTCCGCGGCGGCGTAAGCCCCCGCACCGCGATCCTGCCATTGCTCAACGGCATGAAGCA
TCTCGACGTGCTCGACACCGCGTTTGGCCGCGACCGCGTGCTCGGCGGCCAATGCGTGATCGCTGCGACGCTCGATGCGC
AGCGCCATGTCGTGCAGCTCGCTCCGATGAGCGCGATCACGTTTGGCGAGCGCGATGGCGCGTCGTCGGAGCGCGTGGCG
CAGATCGCGGTGGCGCTCGGCGGCAGCGACTTCGGCGTCAACGCATCGCCGGTGATCATGCAGGAGATGTGGGAGAAGTG
GGTGTTTCTGGCGACGCTCGCCGGTTCCACCTCGCTAATGCGCGGCGCGGTCGGTGAGATCCTGGTGGCGCCCGGCGGGG
CCGACTTCATGCTCGGCGTGCTCGACGAGATCACCTCGATCGCGGCAGCGGCGGGCCATCCCCCGCGTCCGGTGGCTGTT
GAACGCACTCGCAACATGCTTCTCGCCGAAGGCTCGACGCTGACCGCGTCGATGTTCCGCGACATCCTGGCGGGCGCCAG
AATCGAAGCCGATCATGTGGTCGGCGATCTGATTGATCGAGCCGACGAAGCCAAGGTTCCAGTGCCGCGGCTTCGGGTGA
TTTACACCCATCTGAAGACCTACGAACGGCGTCGCGGCTGA

Upstream 100 bases:

>100_bases
ATCCGTCCCTACGGCGAGAAGTGGTGAGGGGTATGCCGGCACAGTGCTCGCAGCGGCAGCACGATCCGGCTAAGACTCGC
GAAAATCTCGGGAGGACGTG

Downstream 100 bases:

>100_bases
GGTCGAAAACCGGCTTGTTCCGCGTCGCGGAAGCGAATGAAAATTATTCGCTGAGTCGCGCCTCATTCTTTGGTCGAACG
TCCCGTTTGGCGTGTTCGTC

Product: 2-dehydropantoate 2-reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MRILIVGAGAIGGYFGGRLLQLGRDVTFLVRPGRAAELTRDGLVIKSPHGDATIQNPPAVQAAALTPDYDLVVLSCKAFD
LDDAIASFRGGVSPRTAILPLLNGMKHLDVLDTAFGRDRVLGGQCVIAATLDAQRHVVQLAPMSAITFGERDGASSERVA
QIAVALGGSDFGVNASPVIMQEMWEKWVFLATLAGSTSLMRGAVGEILVAPGGADFMLGVLDEITSIAAAAGHPPRPVAV
ERTRNMLLAEGSTLTASMFRDILAGARIEADHVVGDLIDRADEAKVPVPRLRVIYTHLKTYERRRG

Sequences:

>Translated_306_residues
MRILIVGAGAIGGYFGGRLLQLGRDVTFLVRPGRAAELTRDGLVIKSPHGDATIQNPPAVQAAALTPDYDLVVLSCKAFD
LDDAIASFRGGVSPRTAILPLLNGMKHLDVLDTAFGRDRVLGGQCVIAATLDAQRHVVQLAPMSAITFGERDGASSERVA
QIAVALGGSDFGVNASPVIMQEMWEKWVFLATLAGSTSLMRGAVGEILVAPGGADFMLGVLDEITSIAAAAGHPPRPVAV
ERTRNMLLAEGSTLTASMFRDILAGARIEADHVVGDLIDRADEAKVPVPRLRVIYTHLKTYERRRG
>Mature_306_residues
MRILIVGAGAIGGYFGGRLLQLGRDVTFLVRPGRAAELTRDGLVIKSPHGDATIQNPPAVQAAALTPDYDLVVLSCKAFD
LDDAIASFRGGVSPRTAILPLLNGMKHLDVLDTAFGRDRVLGGQCVIAATLDAQRHVVQLAPMSAITFGERDGASSERVA
QIAVALGGSDFGVNASPVIMQEMWEKWVFLATLAGSTSLMRGAVGEILVAPGGADFMLGVLDEITSIAAAAGHPPRPVAV
ERTRNMLLAEGSTLTASMFRDILAGARIEADHVVGDLIDRADEAKVPVPRLRVIYTHLKTYERRRG

Specific function: Unknown

COG id: COG1893

COG function: function code H; Ketopantoate reductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ketopantoate reductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR003710
- InterPro:   IPR013752
- InterPro:   IPR013332
- InterPro:   IPR013328
- InterPro:   IPR016040 [H]

Pfam domain/function: PF02558 ApbA; PF08546 ApbA_C [H]

EC number: NA

Molecular weight: Translated: 32427; Mature: 32427

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILIVGAGAIGGYFGGRLLQLGRDVTFLVRPGRAAELTRDGLVIKSPHGDATIQNPPAV
CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCEEEECCCCCCCCCCCCCC
QAAALTPDYDLVVLSCKAFDLDDAIASFRGGVSPRTAILPLLNGMKHLDVLDTAFGRDRV
EEEEECCCCCEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCE
LGGQCVIAATLDAQRHVVQLAPMSAITFGERDGASSERVAQIAVALGGSDFGVNASPVIM
ECCCEEEEEECCCCHHEEEECCCCEEECCCCCCCCHHHHHEEEEEECCCCCCCCCCHHHH
QEMWEKWVFLATLAGSTSLMRGAVGEILVAPGGADFMLGVLDEITSIAAAAGHPPRPVAV
HHHHHHHEEEHHHCCCHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEH
ERTRNMLLAEGSTLTASMFRDILAGARIEADHVVGDLIDRADEAKVPVPRLRVIYTHLKT
HHHCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
YERRRG
HHHHCC
>Mature Secondary Structure
MRILIVGAGAIGGYFGGRLLQLGRDVTFLVRPGRAAELTRDGLVIKSPHGDATIQNPPAV
CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCEEEECCCCCCCCCCCCCC
QAAALTPDYDLVVLSCKAFDLDDAIASFRGGVSPRTAILPLLNGMKHLDVLDTAFGRDRV
EEEEECCCCCEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCE
LGGQCVIAATLDAQRHVVQLAPMSAITFGERDGASSERVAQIAVALGGSDFGVNASPVIM
ECCCEEEEEECCCCHHEEEECCCCEEECCCCCCCCHHHHHEEEEEECCCCCCCCCCHHHH
QEMWEKWVFLATLAGSTSLMRGAVGEILVAPGGADFMLGVLDEITSIAAAAGHPPRPVAV
HHHHHHHEEEHHHCCCHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEH
ERTRNMLLAEGSTLTASMFRDILAGARIEADHVVGDLIDRADEAKVPVPRLRVIYTHLKT
HHHCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
YERRRG
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]