Definition Lactobacillus casei BL23 chromosome, complete genome.
Accession NC_010999
Length 3,079,196

Click here to switch to the map view.

The map label for this gene is opuCc

Identifier: 191636888

GI number:

Start: 62558

End: 63469

Strand: Reverse

Name: opuCc

Synonym: LCABL_00640

Alternate gene names: NA

Gene position: NA

Preceding gene: 191636889

Following gene: 191636887

Centisome position: NA

GC content: NA

Gene sequence:

>912_bases
ATGCTCCTATCGCTGTTCCTCATCCCCGTCTTGCTATTAGGCGGCTGCGGCTTTCCCGGACTGGGCGGCTCTGGTAATGA
CGGTACTGTGCGGATCGCTTCGCAAACCAGTACTGAATCGCAGATCATGGCAAATATCATTGCCGAACTCATTAATCATG
AACTCGGCTACAAAACGACTTTGGTCAACAACCTGGGTTCTGGTACCGTGGTGCATCAAGCGATGATTCGTAACGATGCT
GACATTAGTGCTACCCGTTACACTGGGACCGACATTACCGGTACCTTAGGCATGAATCCCGTCAAGGATCCTGCCGAAGC
TACGGCGATTGTTAAGCGCGAATTCAAAAAGCGTTACGACCAGACTTGGTACCCGTCTTATGGTTTTTCCGACACTTATG
CTTTCATGGTGACCCAACAGGAAGCCAAAAAGGACGGTTTGAGCACCATTTCCGATTTGAAGAAAGTCGCTTCGCGTTAC
AACGCGGGCGTAGATTCCAGTTGGATGAACCGCAAAGGCGACGGTTATAGCGACTTCACCAAAATGTATGGGTTCGATTT
CAAACGAGTCTACCCGATGCAGATCGGACTGGTTTACGACGCGGTCGAAGCCAACAAGATGCAGACGGTCTTAGGTTACT
CAACAGACGGCCGCATTCGCAGTTACAACTTGAAAGTGCTGAAGGATGACAAAAAGTTCTTCCCACCTTATCAATGTTCG
CTCGTCGTCAACAACAGCTTTTTGAAAAAATACCCGAAACTCAAGCCGCTGTTACATCGGTTAGATGGCAAAATCAACCT
GAAGACGATGCAAGAGCTGAATTATCAAGTCGATGATCAACTGCTTGAACCGAACGTGGTCGCGCAAAAGTTTCTTGCCA
AACACAACTATTTCAAAGGAAGTGACGACTAA

Upstream 100 bases:

>100_bases
TGGCACTCTTGGTTGATTGGCTGCTGGGCCGGCTAGAACATCGGCTGACCCCAGTAAGCGAACAGGCCTAGGAGGTGGCG
AGATGAAGACATTCAGAAAA

Downstream 100 bases:

>100_bases
TGGCCAACATGGATACCTGGCAGCAATTCTGGTACTATCTTGCCAATAATGGCTCGTATGTGCTGAGTCAGTTTGCTCGC
CATTTTCTGATCTCAATTTA

Product: ABC transporter; osmoprotectant-binding protein, glycine betaine/carnitine/choline ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>303_residues
MLLSLFLIPVLLLGGCGFPGLGGSGNDGTVRIASQTSTESQIMANIIAELINHELGYKTTLVNNLGSGTVVHQAMIRNDA
DISATRYTGTDITGTLGMNPVKDPAEATAIVKREFKKRYDQTWYPSYGFSDTYAFMVTQQEAKKDGLSTISDLKKVASRY
NAGVDSSWMNRKGDGYSDFTKMYGFDFKRVYPMQIGLVYDAVEANKMQTVLGYSTDGRIRSYNLKVLKDDKKFFPPYQCS
LVVNNSFLKKYPKLKPLLHRLDGKINLKTMQELNYQVDDQLLEPNVVAQKFLAKHNYFKGSDD

Sequences:
NA

Specific function: NA

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA