| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190895287
Identifier: 190895287
GI number: 190895287
Start: 1058301
End: 1058621
Strand: Reverse
Name: 190895287
Synonym: RHECIAT_PC0000960
Alternate gene names: NA
Gene position: 1058621-1058301 (Counterclockwise)
Preceding gene: 190895288
Following gene: 190895286
Centisome position: 96.99
GC content: 53.58
Gene sequence:
>321_bases ATGCTTCGCAAAATTTCTATCCTCGGAACGCTGATTCTTGCCTCATGCACCTCTCAAGGCTCGAATATGACGCTGGCGTC GATGATCAGCGGTTACCGAAATGCGCCTACCGCCGATGAAGAAGTGGCCTGGCGCAACGCACGGCGAAGCAACACCGATC AAGCCTATCGCAACTTTATCAGCAAGTATCCGAACAGTTCCTATGTCCCGGTTGCGGCATCAAGGGTTACCCGGTCGGTC AAACCGAAGCCAGTAGCTGTCAGAAATTTGGACAATCCCGAACGTAACTCGTCTTTCGGCCGCAGCGGCAGCGCTTATTG A
Upstream 100 bases:
>100_bases GGCCGCATCGTACCAGCGAAAATAATGAGTTTGACCTTGCGGGCATTGACTTCGGTAGTTTGTGAATGCTTACTAAAATA AGCTGCGGGGAGGGCAACAT
Downstream 100 bases:
>100_bases AGCAACCAACCTGTCAACGGCGAACTGACTCTGGTAGCATTGATAGACCCAATCTGGCTTTCGAATGCATTTTGATATTG TCCATGCAGCCGATCCTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MLRKISILGTLILASCTSQGSNMTLASMISGYRNAPTADEEVAWRNARRSNTDQAYRNFISKYPNSSYVPVAASRVTRSV KPKPVAVRNLDNPERNSSFGRSGSAY
Sequences:
>Translated_106_residues MLRKISILGTLILASCTSQGSNMTLASMISGYRNAPTADEEVAWRNARRSNTDQAYRNFISKYPNSSYVPVAASRVTRSV KPKPVAVRNLDNPERNSSFGRSGSAY >Mature_106_residues MLRKISILGTLILASCTSQGSNMTLASMISGYRNAPTADEEVAWRNARRSNTDQAYRNFISKYPNSSYVPVAASRVTRSV KPKPVAVRNLDNPERNSSFGRSGSAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11646; Mature: 11646
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRKISILGTLILASCTSQGSNMTLASMISGYRNAPTADEEVAWRNARRSNTDQAYRNFI CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHH SKYPNSSYVPVAASRVTRSVKPKPVAVRNLDNPERNSSFGRSGSAY HHCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLRKISILGTLILASCTSQGSNMTLASMISGYRNAPTADEEVAWRNARRSNTDQAYRNFI CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHH SKYPNSSYVPVAASRVTRSVKPKPVAVRNLDNPERNSSFGRSGSAY HHCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA