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The map label for this gene is 190895203

Identifier: 190895203

GI number: 190895203

Start: 967691

End: 968179

Strand: Reverse

Name: 190895203

Synonym: RHECIAT_PC0000876

Alternate gene names: NA

Gene position: 968179-967691 (Counterclockwise)

Preceding gene: 190895204

Following gene: 190895198

Centisome position: 88.7

GC content: 56.24

Gene sequence:

>489_bases
ATGAATCGCCGTACAGCAGCCACCCAAGTCCGATCGTCGACGCGAGCGCCGGCTGCGCAGTCGAGTATCGCACGCGAGTC
GGCACATCCGGTCGATCTGCATGTCGGACAGCAGATCCGTATCCGCCGAATGCAGTCAGATGTATCGCTAGGCGATCTTG
GCGCCGGCATCGGCGTCAGCCTGCAGCAGGTTCAGAAATATGAAAGTGGAAAAAACCGCGTCAGTGCCTCCATGCTCTAT
GAGCTTGCCAATTGCCTCAAGATTCCGGTCTCAAAGTTTTTCGAGGGCCTTCCAGATCCCGAAACCTCTCAGGACGCTAT
ACACGCAACGAAGATCGACGACAGGATTGCATACATCTCCACCGCGGAAGGGAGACGTCTGATAGAAGACGTTTTGCTGC
TTCCGGCCCGTGTGCGCAGTCGCGTGGTTGCACTCGTCAGCTCGATTGTCGATGAAGAGATGAAAGAACAGTCGGACGTT
GGTCGCTAG

Upstream 100 bases:

>100_bases
AGGGCCGTCTTGTACGGTTTCCAACTCCCCGATCAGTGGGTTTGAGCGAGTTATTCCGCGGGGGCGCACCGCGTGAAACT
CTCCACACGGGGTGTCGACC

Downstream 100 bases:

>100_bases
GAGAACAGAAAAAAGGGCAGCCGCGGCCCCGCTGGTTGTCGAGCCGGATGCCGGCCCCGCATCGCGTTTCCGTTTGTTAT
CTAGAGAGCGATCCGCCCGA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MNRRTAATQVRSSTRAPAAQSSIARESAHPVDLHVGQQIRIRRMQSDVSLGDLGAGIGVSLQQVQKYESGKNRVSASMLY
ELANCLKIPVSKFFEGLPDPETSQDAIHATKIDDRIAYISTAEGRRLIEDVLLLPARVRSRVVALVSSIVDEEMKEQSDV
GR

Sequences:

>Translated_162_residues
MNRRTAATQVRSSTRAPAAQSSIARESAHPVDLHVGQQIRIRRMQSDVSLGDLGAGIGVSLQQVQKYESGKNRVSASMLY
ELANCLKIPVSKFFEGLPDPETSQDAIHATKIDDRIAYISTAEGRRLIEDVLLLPARVRSRVVALVSSIVDEEMKEQSDV
GR
>Mature_162_residues
MNRRTAATQVRSSTRAPAAQSSIARESAHPVDLHVGQQIRIRRMQSDVSLGDLGAGIGVSLQQVQKYESGKNRVSASMLY
ELANCLKIPVSKFFEGLPDPETSQDAIHATKIDDRIAYISTAEGRRLIEDVLLLPARVRSRVVALVSSIVDEEMKEQSDV
GR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 17785; Mature: 17785

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRTAATQVRSSTRAPAAQSSIARESAHPVDLHVGQQIRIRRMQSDVSLGDLGAGIGVS
CCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCEECCCCHHHHHHHHHCCCHHHCCCCCCHH
LQQVQKYESGKNRVSASMLYELANCLKIPVSKFFEGLPDPETSQDAIHATKIDDRIAYIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHCCHHHEEE
TAEGRRLIEDVLLLPARVRSRVVALVSSIVDEEMKEQSDVGR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNRRTAATQVRSSTRAPAAQSSIARESAHPVDLHVGQQIRIRRMQSDVSLGDLGAGIGVS
CCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCEECCCCHHHHHHHHHCCCHHHCCCCCCHH
LQQVQKYESGKNRVSASMLYELANCLKIPVSKFFEGLPDPETSQDAIHATKIDDRIAYIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHCCHHHEEE
TAEGRRLIEDVLLLPARVRSRVVALVSSIVDEEMKEQSDVGR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]