| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190895171
Identifier: 190895171
GI number: 190895171
Start: 924071
End: 924694
Strand: Reverse
Name: 190895171
Synonym: RHECIAT_PC0000844
Alternate gene names: NA
Gene position: 924694-924071 (Counterclockwise)
Preceding gene: 190895172
Following gene: 190895168
Centisome position: 84.72
GC content: 57.37
Gene sequence:
>624_bases ATGCTGTCAACTGCCTGCGGGGCGTTGACAATATTCGCTGGCAGCGAGCTCTATACAACAGTTCGATACAGCGATCTCGT GTTGGCGGCTGCTCGCGTTGAGACTGGGCATTCGCTGAGTCAGCAAGCGGCAGGGCGTGCAGCCGCGCTGTCGCTGGAGC TCGAACAATCCCACGAGTGCCGAGAAGACTTGGTTATGCCGGCAGTCACAATTATGCTTAACGCAGCCGATGAGGCGGGG CAGGAGCCAAATCTCTCGGCTTGGGTTGATGCCCTCAATCGTGCCGACCGATACATGAAATTCGCTCTGGGGTGTTCGCC AAATGAAGGAAACTATTGGCTTCGCCTTGCGATGATTCGAAGGCTGCAGGGCGAAAATTCGGCAGAGCTTGCTACTCTTA TGTCGTTGTCAGCCAGGTACGCGCCCGTCGAGCCGGACGTGCTAAGCCTTCGGATGCGCGTTTGGCTTAGCCTTCAGCCC GTTACCCGCTCGGCCGCCGCCGCTGCCCTCGCTTCGGACCTGGCGAATTTTCTGACGCATGCATCCGTTCAAGACATCAA GAACTTCAGCTCGGCAGTCGACATGGATATGCAGTCCAGGATGATGGACGCGAGACGAAAGTAG
Upstream 100 bases:
>100_bases GAAACTCTATCGGTCGCGTGGCTCGGTTGAGTACTATCATTCAGCATACTCAGATTATTACGTGGAAGACAAGTAGAACG TGAGATCCGTACTGGGATGG
Downstream 100 bases:
>100_bases CGCGTCTAGGAAGCGTCTTTACGATCTTTCGTCTTGCGCCGACACGGCTTCGTGTTTTACGAAAAGCTTCTTGAAGCGGC TAGGCACCAGAAACAGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MLSTACGALTIFAGSELYTTVRYSDLVLAAARVETGHSLSQQAAGRAAALSLELEQSHECREDLVMPAVTIMLNAADEAG QEPNLSAWVDALNRADRYMKFALGCSPNEGNYWLRLAMIRRLQGENSAELATLMSLSARYAPVEPDVLSLRMRVWLSLQP VTRSAAAAALASDLANFLTHASVQDIKNFSSAVDMDMQSRMMDARRK
Sequences:
>Translated_207_residues MLSTACGALTIFAGSELYTTVRYSDLVLAAARVETGHSLSQQAAGRAAALSLELEQSHECREDLVMPAVTIMLNAADEAG QEPNLSAWVDALNRADRYMKFALGCSPNEGNYWLRLAMIRRLQGENSAELATLMSLSARYAPVEPDVLSLRMRVWLSLQP VTRSAAAAALASDLANFLTHASVQDIKNFSSAVDMDMQSRMMDARRK >Mature_207_residues MLSTACGALTIFAGSELYTTVRYSDLVLAAARVETGHSLSQQAAGRAAALSLELEQSHECREDLVMPAVTIMLNAADEAG QEPNLSAWVDALNRADRYMKFALGCSPNEGNYWLRLAMIRRLQGENSAELATLMSLSARYAPVEPDVLSLRMRVWLSLQP VTRSAAAAALASDLANFLTHASVQDIKNFSSAVDMDMQSRMMDARRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22587; Mature: 22587
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSTACGALTIFAGSELYTTVRYSDLVLAAARVETGHSLSQQAAGRAAALSLELEQSHEC CCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHEEEEEHHHHHHH REDLVMPAVTIMLNAADEAGQEPNLSAWVDALNRADRYMKFALGCSPNEGNYWLRLAMIR HHHHHHHHHHHHEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH RLQGENSAELATLMSLSARYAPVEPDVLSLRMRVWLSLQPVTRSAAAAALASDLANFLTH HHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHH ASVQDIKNFSSAVDMDMQSRMMDARRK HHHHHHHHHHHHHCHHHHHHHHHHHCC >Mature Secondary Structure MLSTACGALTIFAGSELYTTVRYSDLVLAAARVETGHSLSQQAAGRAAALSLELEQSHEC CCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHEEEEEHHHHHHH REDLVMPAVTIMLNAADEAGQEPNLSAWVDALNRADRYMKFALGCSPNEGNYWLRLAMIR HHHHHHHHHHHHEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH RLQGENSAELATLMSLSARYAPVEPDVLSLRMRVWLSLQPVTRSAAAAALASDLANFLTH HHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHH ASVQDIKNFSSAVDMDMQSRMMDARRK HHHHHHHHHHHHHCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA