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The map label for this gene is 190895168

Identifier: 190895168

GI number: 190895168

Start: 920063

End: 921301

Strand: Reverse

Name: 190895168

Synonym: RHECIAT_PC0000841

Alternate gene names: NA

Gene position: 921301-920063 (Counterclockwise)

Preceding gene: 190895171

Following gene: 190895164

Centisome position: 84.41

GC content: 53.19

Gene sequence:

>1239_bases
ATGTATATGAAAGAATTTTCGGCATTTCTCACTATTTTGCTCACTTCGATGGTCGTCAGTTCGCCTCTCCAAGCAGAGCA
GTTTGAGCCGAAGTCCCAATGCGGTCTTCAAGCAGGAGCAAGAATAATCCGTGTGACAACGCTCGCTCCGAAAGGGAGGG
GGAGCCTTGATGATGCCGTGAGAACGCCGGGAGCTAAGATAATTGTCTTCGATGTCGGGGGCGTCATCAACCTTGAGTCT
GATGTCGATTTGCGCACTCCGTTCGTAACCTTAGCCGGCGAGACGGCCCCTGCACCGGGCATCACTCTTATTGGCGGTAC
GGTTAGGGTACATAGCCATGACGTCTGTATTCGCCACGTCTCTGTGCGGCCGGGCCCATCAAGCGATCCCGAGGTTTCCG
GCGTCCGCGACGGTATCGCGATCGGCGGGAACCCCGCAAAATACGGGGGCGCAATTAAGGATGTGGTTATAGAAAATGTT
AGCGTGAGCTGGGCCATCGACGAAAATCTTAGTGTCTGGCATGCAGGTACCAACAATGTTCAGATTAGAAACTCAATTAT
ATCTGAAGCATTGCGAGCTGCGGGTCATCCAAAAGGGATCCATTCGATGGGATTCCTGATTGGGTCAGACGTGTCCGATG
TTGACATATCGGGGGTGTTGTTCGCGCATAACAATGACCGAAATCCGCGAATTAGTCCGAGGACGACTGTGTCCTTGTCG
AACTCAGTTGTCTACGATCCGGGCCGGAGGAGTACCGAGATCTTTTTGGATTGCACCGAGGGAAAATACCCAGTTCGGCT
GAGCGGCAATGTATTGGTGCCGGGACCAAGCACCTATAGGAAGGTGTCCCAGTACGAATTCGTCGATGATGCTTCCCGCG
ACACGATCCATGCGGGTTCCGATTGTAAAACCGGCTTTGATTCGCTGACGATGGAACAAGGAAATGAAGCAGAAACCATT
GGCTCAGTTCTCCGCTACGCTGGCTCGCGTCCGGCTCAGCGTAATGAAGTTGACGCCAGAATTGTAAAGGAAGTTCGATC
TGGCGGCGGCGCTATCGTGGACGACCCACCAGAAGGCGCTCAAAATCTGGACTCGTCTTCTGGAGAGCGAGCATTCGTTC
TTCCCGACGCGCCTTTCGCAAAGGCATCAGACGGTCGATATAAGATCGCGGTCTCATTGTGCAATGCTCATCTTAAGCTG
GGCGGCGCACCCTATCAAGGGTGCGAAGCCCAAATGTAA

Upstream 100 bases:

>100_bases
GTGCGACAACATCAATCGGGACAATAGACGTGCTCTAATATAAACAGGTGAACAAAACATCCTCTCGACAGCTCCTACAC
AACATTTGCGAAAGATAAAA

Downstream 100 bases:

>100_bases
TTCGGCTCGCGCAAATTTCAGCCAGCTGTGTTTGCGCTGCCCTTCTTGCCAACGGCGAAATAGCTGAAACCGTGACGACT
GACTTCGGCGGCGGGGTAGA

Product: putative pectate lyase

Products: NA

Alternate protein names: Pectinesterase; Pectate Lyase Protein; Fibronectin Type III Domain-Containing Protein; Polysaccharide Lyase Family; 50S Ribosomal Protein L; Pectate Lysase; Ricin B Lectin; PKD Domain Containing Protein; Pectate Lyase/Amb Allergen

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MYMKEFSAFLTILLTSMVVSSPLQAEQFEPKSQCGLQAGARIIRVTTLAPKGRGSLDDAVRTPGAKIIVFDVGGVINLES
DVDLRTPFVTLAGETAPAPGITLIGGTVRVHSHDVCIRHVSVRPGPSSDPEVSGVRDGIAIGGNPAKYGGAIKDVVIENV
SVSWAIDENLSVWHAGTNNVQIRNSIISEALRAAGHPKGIHSMGFLIGSDVSDVDISGVLFAHNNDRNPRISPRTTVSLS
NSVVYDPGRRSTEIFLDCTEGKYPVRLSGNVLVPGPSTYRKVSQYEFVDDASRDTIHAGSDCKTGFDSLTMEQGNEAETI
GSVLRYAGSRPAQRNEVDARIVKEVRSGGGAIVDDPPEGAQNLDSSSGERAFVLPDAPFAKASDGRYKIAVSLCNAHLKL
GGAPYQGCEAQM

Sequences:

>Translated_412_residues
MYMKEFSAFLTILLTSMVVSSPLQAEQFEPKSQCGLQAGARIIRVTTLAPKGRGSLDDAVRTPGAKIIVFDVGGVINLES
DVDLRTPFVTLAGETAPAPGITLIGGTVRVHSHDVCIRHVSVRPGPSSDPEVSGVRDGIAIGGNPAKYGGAIKDVVIENV
SVSWAIDENLSVWHAGTNNVQIRNSIISEALRAAGHPKGIHSMGFLIGSDVSDVDISGVLFAHNNDRNPRISPRTTVSLS
NSVVYDPGRRSTEIFLDCTEGKYPVRLSGNVLVPGPSTYRKVSQYEFVDDASRDTIHAGSDCKTGFDSLTMEQGNEAETI
GSVLRYAGSRPAQRNEVDARIVKEVRSGGGAIVDDPPEGAQNLDSSSGERAFVLPDAPFAKASDGRYKIAVSLCNAHLKL
GGAPYQGCEAQM
>Mature_412_residues
MYMKEFSAFLTILLTSMVVSSPLQAEQFEPKSQCGLQAGARIIRVTTLAPKGRGSLDDAVRTPGAKIIVFDVGGVINLES
DVDLRTPFVTLAGETAPAPGITLIGGTVRVHSHDVCIRHVSVRPGPSSDPEVSGVRDGIAIGGNPAKYGGAIKDVVIENV
SVSWAIDENLSVWHAGTNNVQIRNSIISEALRAAGHPKGIHSMGFLIGSDVSDVDISGVLFAHNNDRNPRISPRTTVSLS
NSVVYDPGRRSTEIFLDCTEGKYPVRLSGNVLVPGPSTYRKVSQYEFVDDASRDTIHAGSDCKTGFDSLTMEQGNEAETI
GSVLRYAGSRPAQRNEVDARIVKEVRSGGGAIVDDPPEGAQNLDSSSGERAFVLPDAPFAKASDGRYKIAVSLCNAHLKL
GGAPYQGCEAQM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 4.2.2.2

Molecular weight: Translated: 43729; Mature: 43729

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYMKEFSAFLTILLTSMVVSSPLQAEQFEPKSQCGLQAGARIIRVTTLAPKGRGSLDDAV
CCHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHCHHHCCEEEEEEEECCCCCCCCHHHH
RTPGAKIIVFDVGGVINLESDVDLRTPFVTLAGETAPAPGITLIGGTVRVHSHDVCIRHV
HCCCCEEEEEECCCEEEECCCCCCCCCEEEEECCCCCCCCEEEECCEEEEECCCEEEEEE
SVRPGPSSDPEVSGVRDGIAIGGNPAKYGGAIKDVVIENVSVSWAIDENLSVWHAGTNNV
EECCCCCCCCCCCCCCCCEEECCCCHHHCCHHHHHEEECCEEEEEECCCCEEEECCCCCE
QIRNSIISEALRAAGHPKGIHSMGFLIGSDVSDVDISGVLFAHNNDRNPRISPRTTVSLS
EEHHHHHHHHHHHCCCCCCHHHHHHEECCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEC
NSVVYDPGRRSTEIFLDCTEGKYPVRLSGNVLVPGPSTYRKVSQYEFVDDASRDTIHAGS
CCEEECCCCCCEEEEEEECCCCCEEEEECCEEECCCHHHHHHHHHHHCCCCCCCCEECCC
DCKTGFDSLTMEQGNEAETIGSVLRYAGSRPAQRNEVDARIVKEVRSGGGAIVDDPPEGA
CCCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCH
QNLDSSSGERAFVLPDAPFAKASDGRYKIAVSLCNAHLKLGGAPYQGCEAQM
HHCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEECHHEECCCCCCCCCCCC
>Mature Secondary Structure
MYMKEFSAFLTILLTSMVVSSPLQAEQFEPKSQCGLQAGARIIRVTTLAPKGRGSLDDAV
CCHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHCHHHCCEEEEEEEECCCCCCCCHHHH
RTPGAKIIVFDVGGVINLESDVDLRTPFVTLAGETAPAPGITLIGGTVRVHSHDVCIRHV
HCCCCEEEEEECCCEEEECCCCCCCCCEEEEECCCCCCCCEEEECCEEEEECCCEEEEEE
SVRPGPSSDPEVSGVRDGIAIGGNPAKYGGAIKDVVIENVSVSWAIDENLSVWHAGTNNV
EECCCCCCCCCCCCCCCCEEECCCCHHHCCHHHHHEEECCEEEEEECCCCEEEECCCCCE
QIRNSIISEALRAAGHPKGIHSMGFLIGSDVSDVDISGVLFAHNNDRNPRISPRTTVSLS
EEHHHHHHHHHHHCCCCCCHHHHHHEECCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEC
NSVVYDPGRRSTEIFLDCTEGKYPVRLSGNVLVPGPSTYRKVSQYEFVDDASRDTIHAGS
CCEEECCCCCCEEEEEEECCCCCEEEEECCEEECCCHHHHHHHHHHHCCCCCCCCEECCC
DCKTGFDSLTMEQGNEAETIGSVLRYAGSRPAQRNEVDARIVKEVRSGGGAIVDDPPEGA
CCCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCH
QNLDSSSGERAFVLPDAPFAKASDGRYKIAVSLCNAHLKLGGAPYQGCEAQM
HHCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEECHHEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA